Pairwise Alignments

Query, 663 a.a., ATPase AAA from Burkholderia phytofirmans PsJN

Subject, 569 a.a., sigma-54 dependent transcriptional regulator/response regulator (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  258 bits (660), Expect = 4e-73
 Identities = 184/500 (36%), Positives = 257/500 (51%), Gaps = 66/500 (13%)

Query: 185 LGAVEEAF-ERSVELARVSRQKESKRVR--LNTIVAHLRDGVAAFDDAGQVEAVNPAMLD 241
           L AV  A   +S++  R +   E +R+R  L  I   + D + +    G+V  +N A L 
Sbjct: 110 LAAVARAHAHKSLQDERAALHDELQRLRAHLEAIFRSVPDVLVSVGRDGRVVRINDAGLG 169

Query: 242 LLGLDRE-------QDVPAQVERAVGPLLRETIEHNLPIEER-----IEQIGGRALIVNC 289
           +L L  E       Q+V  + E  +G +LR  +E    +  R     +++   +   V+ 
Sbjct: 170 VLRLSGEEVEGRHWQEVFGEWESQLGDVLRHALESRQRVPRRRVNITVDEGASQVFEVSA 229

Query: 290 VPIV-EQGVRSGSVITLQDALVAQRIDRSLRTSQRPKHLVARHQLDDLIGNSAALERVRR 348
            P+  E G   G+V+ L+D     R+         P           L+G S A++R+  
Sbjct: 230 SPLRGETGDYLGAVLVLRDI---SRLAACCPPGGAPGEW-------GLVGLSPAMQRIYH 279

Query: 349 LARAGAAHDATVLLSGESGTGKELVAQGIHNASRRRGNPFVAFNCAALPEGLIESELFGH 408
           L    A  D TVL++GESGTGKELVA+ +HNA  R   P +  NCAALPE L+ESELFGH
Sbjct: 280 LLEDLAPTDTTVLVTGESGTGKELVAEALHNAGPRATGPLIKVNCAALPETLLESELFGH 339

Query: 409 EEGAFTGARRGGKPGLFEIAHTGTIFLDEIGEMPAALQSRLLRVLQEREVMKLGSGRATP 468
             GAFTGA R  + G F++AH GTIFLDEIG++   +Q RLLRVLQERE  ++G  R T 
Sbjct: 340 VRGAFTGALRD-RVGRFQLAHGGTIFLDEIGDLSPQVQLRLLRVLQEREFERVGDTRTTR 398

Query: 469 VDVRVIAATHRDLHALVEQGAFRADLYFRLNLLQLKLPPLRDRRDDVPQLARYLLSRSAL 528
           VDVRVIAATHR+L   V  G FR DLY+RL +++L +PPLR+R +D+  LA + +     
Sbjct: 399 VDVRVIAATHRNLRERVASGLFREDLYYRLRVVELHMPPLRERHEDLALLAEHFVGVFNQ 458

Query: 529 QY-----GLTEGASERVLAFLAPLFEHYAWPGNVRELENLLTRAAIYCGDAAGDAGQDWQ 583
           Q+     G TE AS  ++         ++WPGNVREL + +    I C            
Sbjct: 459 QFSRCVMGFTEAASRALMT--------HSWPGNVRELRHAVEHGFILC------------ 498

Query: 584 AMFPEFGRMKAAAATLSDFGVSGTKNGANGVNAAAEPAPSRISPTRGDVLHALEQAGGNR 643
                    K     L+D           G  A+  P   R       V  AL++AGGN+
Sbjct: 499 ---------KGERIDLADL-----PPDVQGTEASVFPRAERSGVHEAAVREALKKAGGNK 544

Query: 644 AAASRALGIGRTTLWRLLKD 663
           A A+R LG+ R TL+R L +
Sbjct: 545 ARAARLLGVARQTLYRKLAE 564