Pairwise Alignments

Query, 383 a.a., amino acid ABC transporter substrate-binding protein from Burkholderia phytofirmans PsJN

Subject, 394 a.a., branched-chain amino acid ABC transporter substrate-binding protein from Herbaspirillum seropedicae SmR1

 Score =  273 bits (699), Expect = 5e-78
 Identities = 149/384 (38%), Positives = 220/384 (57%), Gaps = 11/384 (2%)

Query: 8   LSATVCALATY-MPFSWAADPQI----------VKIGFVGPLTGPVARVGKDLQYGAQLA 56
           L A + ALAT   P    A P+           + IGF GPL+GP   VGK +Q G QLA
Sbjct: 7   LLAALLALATLGAPVGATAQPRAPLPDRQETATLAIGFAGPLSGPSGGVGKSMQNGVQLA 66

Query: 57  LDEENAKNPMIGGKPVKFVLDVQDDQADPRVAIQVAQKLVDDGVVGVIGHYNSGCSIPAS 116
           L E N +   IGGK  +  L  QDD+ADP  A  VA+ LV   V+ V+GH+ SG S+ A+
Sbjct: 67  LAEANRRGLRIGGKSWQLRLIAQDDRADPATAEFVARSLVQQQVIAVVGHWTSGTSLAAA 126

Query: 117 TVYHQANVAMITPGSTNPQLTKQGFKNVFRTMGHDGIGGVVAGHFVVEQMKAKRIAIIDD 176
            VYH+A V  +TP + + +LT   +  +FRT+ ++   G +A  + V++++ + I  IDD
Sbjct: 127 PVYHRAGVIQVTPSAMSRRLTAMSYPRIFRTIPNNESLGRLAAGYAVDKLETRTIVTIDD 186

Query: 177 RTAFGQGLADAFEKGVKEANGNIVDREFTNDKAIDFRAILTTLKSKNVDLIFFGGLDEQG 236
           RT FGQGLA+ F +   E    +V R   +DK  DF A L   +    DLIFFGGLD Q 
Sbjct: 187 RTPFGQGLAEQFARTASERGAQVVGRYSVSDKTSDFNAALLEARKLQPDLIFFGGLDWQA 246

Query: 237 AMLVKQMRSLGMSTQLFGAGALKSNAFLQIAGTAGNGTQDLEPGPALDKLPAAQAFGKRY 296
            +L K +R L +  +L  +       FL  AG   NG   LEPGP  DK+P  ++F +RY
Sbjct: 247 GVLAKSIRRLKLHARLMASPGTLGLPFLMRAGPDANGALVLEPGPPQDKMPGWKSFRQRY 306

Query: 297 KARFNQDVELYAPFSYDAALAMLKAIHTADSLDRAKIVDSLAKVTVTGVTGNITFDPYGD 356
              F+ D++LYA F+Y+AA A+++ I  A S D  +I +++ ++   GV+G + F+  GD
Sbjct: 307 SENFDSDMDLYAVFAYEAAQAIIQGIRQAGSADPERIAEAMHRLRFEGVSGPVAFNEEGD 366

Query: 357 LIKPPYTLFQVEQGQWKSVKTVGG 380
           L++P +T+++V+  +W+ V    G
Sbjct: 367 LLQPSFTMYEVKDQRWQPVARFNG 390