Pairwise Alignments

Query, 383 a.a., amino acid ABC transporter substrate-binding protein from Burkholderia phytofirmans PsJN

Subject, 378 a.a., L-proline ABC transporter, substrate-binding component (from data) from Herbaspirillum seropedicae SmR1

 Score =  273 bits (697), Expect = 8e-78
 Identities = 151/372 (40%), Positives = 219/372 (58%), Gaps = 4/372 (1%)

Query: 1   MNRRYWLLSATVCALATYMPFSWAADPQIVKIGFVGPLTGPVARVGKDLQYGAQLALDEE 60
           M +R   L+    +LA    F+ A + Q+VKIGF  PLTGP A  GKD Q G  +A++  
Sbjct: 1   MFKRVSGLNIIAASLALIPAFAMAQETQVVKIGFSSPLTGPQASAGKDNQGGLMMAIERL 60

Query: 61  NAKNPMIGGKPVKFVLDVQDDQADPRVAIQVAQKLVDDGVVGVIGHYNSGCSIPASTVYH 120
           NA+   +GGK +KF +  +DDQADP+  + VAQKL D GV  ++G YNSG +IPAS VY+
Sbjct: 61  NAQPITVGGKKIKFDVIAEDDQADPKSGVAVAQKLADQGVKAIVGPYNSGVTIPASRVYN 120

Query: 121 QANVAMITPGSTNPQLTKQGFKNVFRTMGHDGIGGVVAGHFVVEQMKAKRIAIIDDRTAF 180
            A + + T  S NP++T+QGF  +FR    D   G     +  +++K KR+A+IDDRTA+
Sbjct: 121 DAGIVVATVAS-NPKITQQGFATLFRVAASDSQLGGKMALYAAKELKFKRVAVIDDRTAY 179

Query: 181 GQGLADAFEKGVKEANG-NIVDREFTNDKAIDFRAILTTLKSKNVDLIFFGGLDEQGAML 239
           GQGLA  F K V +ANG ++V  +FTNDKA DF AILT++K K  D +F GG   QG  +
Sbjct: 180 GQGLAQEFIK-VAKANGIDVVSTDFTNDKATDFTAILTSIKGKKPDAVFLGGYAPQGGPI 238

Query: 240 VKQMRSLGMSTQLFGAGALKSNAFLQIAGTA-GNGTQDLEPGPALDKLPAAQAFGKRYKA 298
            +QM+ LG+   L G   + S    ++ G A G      + G  LDK    + F   Y+ 
Sbjct: 239 KRQMKQLGVDVPLMGGDGICSPEMGRLGGDAIGESVYCTQGGTMLDKAKEGKVFSDEYQK 298

Query: 299 RFNQDVELYAPFSYDAALAMLKAIHTADSLDRAKIVDSLAKVTVTGVTGNITFDPYGDLI 358
           ++N+  E YA   YD  + + +A+  A+S+D  +   +LAK++  GV G   FD   DL 
Sbjct: 299 KYNRPAETYAVSFYDGMMLIAQAMKQANSVDPKQFGPALAKISYKGVAGQYDFDANHDLK 358

Query: 359 KPPYTLFQVEQG 370
           + P T+++ + G
Sbjct: 359 QSPVTVYRFKDG 370