Pairwise Alignments

Query, 246 a.a., type III secretion protein from Burkholderia phytofirmans PsJN

Subject, 378 a.a., flagellar biosynthetic protein FlhB from Pseudomonas stutzeri RCH2

 Score = 98.2 bits (243), Expect = 2e-25
 Identities = 71/251 (28%), Positives = 119/251 (47%), Gaps = 10/251 (3%)

Query: 2   SDKTEAPTPNRLRRARKDGDIAKSTHVSVAVSGLFWLLFLLMDAPHVYQVCVHVVEVA-- 59
           +DK+E PT  RLR +R+ G +A+S  +S     L  +  LL     + Q  + +++    
Sbjct: 8   ADKSEEPTEKRLRESREKGQLARSRELSTVAVTLGGIGGLLASGGSLAQTLMAMMQGTFE 67

Query: 60  ----TQIDQGQPFAVRYLQITRAFGAAMPILLATLGVGALAVVVPEVAQAGGVFAVKRAL 115
               T +D+G    +       A  A MP+L+A L    +A +V  V+  G +F+ K   
Sbjct: 68  LSRETLLDEGSMVRLLMGSGLMALEAIMPLLIALL----IASIVGPVSLGGWLFSAKAMA 123

Query: 116 PDFKRLNPVTGLKNLFGLKTLIDTGIVLMQFCILVFVLWHAFATWCAQLLPAFALAFGGQ 175
           P   R+NP  GLK +F  K L++    L +F +++ V     + +   LL          
Sbjct: 124 PKVSRMNPAAGLKRMFSTKALVELLKALGKFLVVLGVALLVLSAYQDDLLSIAKQPLDLA 183

Query: 176 LSVTAQSLAQLQGLMAASQLAPAAIDFWLQRLQWRRRLRMDKNEIKREHRDEDGDPHVKG 235
           +  +A+ +      MA   +  AA+D   Q    +++L M K E+K E++D +G P VK 
Sbjct: 184 IMHSAEIVGWCALWMACGLIVIAAVDVPFQLWDNKQKLMMTKQEVKDEYKDSEGKPEVKS 243

Query: 236 RRRALHRELSR 246
           R R L RE ++
Sbjct: 244 RIRQLQREAAQ 254