Pairwise Alignments

Query, 172 a.a., RNA polymerase subunit sigma-24 from Burkholderia phytofirmans PsJN

Subject, 172 a.a., sigma-70 family RNA polymerase sigma factor from Rahnella sp. WP5

 Score = 95.5 bits (236), Expect = 4e-25
 Identities = 63/165 (38%), Positives = 89/165 (53%), Gaps = 11/165 (6%)

Query: 2   DVRDELMEHVPRLRRYARALINNRDLADDLVQDTLERALGRTGMFQPGTDLRAWLFTIMH 61
           D+R EL + + RL RYA  L    D+ADDLVQ T  RAL R    +  T +  WLF+I+H
Sbjct: 5   DLRSELSQCLSRLWRYAMVLSRKHDVADDLVQSTCVRALERCAQIKDSTGVDRWLFSILH 64

Query: 62  NVFANQARKASARAVHVAVDDESVSESEFAVPSEQTRSLEMR----DLDYALQRLPMEQR 117
           +++ N+      RA +V          E   P++ T S E R     +   + RLP  QR
Sbjct: 65  SIWVNE-----LRAQYVRQGQGFADVDETQAPAD-TLSFEERHWHTQVMQRVNRLPEAQR 118

Query: 118 EVVLLVGLEEMSYADVALALNIPLGTVMSRLSRGRERLRALMAGT 162
             V LV +E  +Y + A+ L++P+GT+MSRL+  R  L A  AGT
Sbjct: 119 NAVFLVYVEGFTYQEAAMTLSVPIGTIMSRLATARLTL-AKDAGT 162