Pairwise Alignments

Query, 172 a.a., RNA polymerase subunit sigma-24 from Burkholderia phytofirmans PsJN

Subject, 193 a.a., RNA polymerase sigma factor from Ralstonia sp. UNC404CL21Col

 Score =  110 bits (274), Expect = 2e-29
 Identities = 70/178 (39%), Positives = 94/178 (52%), Gaps = 28/178 (15%)

Query: 2   DVRDELMEHVPRLRRYARALINNRDLADDLVQDTLERA------------------LGRT 43
           D+   L+   PRLRR+AR L+ +   ADDL+QDTLERA                  +G  
Sbjct: 3   DLASRLIALTPRLRRHARGLVRDASRADDLLQDTLERAWRYRWRFQLRPRLGPLGAIGAM 62

Query: 44  GMFQPGTDLRAWLFTIMHNVFANQARKASARAVHVAVDDESVSESEFAVPSEQTRSLEMR 103
           G       L AWL TIMH +  N  R+          D   +S++   +P +    +  R
Sbjct: 63  GAKDESDGLFAWLLTIMHRLHLNAVRRP---------DRIELSDAPPEIPVDDDPGVR-R 112

Query: 104 DLDYALQRLPMEQREVVLLVGLEEMSYADVALALNIPLGTVMSRLSRGRERLRALMAG 161
           DL  AL  LP +QR V+LLVGLE+ +Y + A  L +P+GTVMSRLSR RER+R  + G
Sbjct: 113 DLLRALATLPEDQRAVLLLVGLEQFAYKEAADVLGVPVGTVMSRLSRARERMRVALEG 170