Pairwise Alignments

Query, 360 a.a., ionic transporter y4hA from Burkholderia phytofirmans PsJN

Subject, 366 a.a., sodium-potassium/proton antiporter ChaA from Rahnella sp. WP5

 Score =  213 bits (541), Expect = 8e-60
 Identities = 131/354 (37%), Positives = 203/354 (57%), Gaps = 20/354 (5%)

Query: 6   IVLPRWTIAAPFLAWIVLGIGYAMPDSGLLLVLVGVALCAAVFTAVHHAEVVAHRVGEPF 65
           IVL  W  ++ F +  V+GI         L+ LVG+   A+ F+ V HA+V+AHR+GEP+
Sbjct: 27  IVLILWGNSSNFAS--VVGIN--------LIALVGIL--ASAFSVVRHADVLAHRLGEPY 74

Query: 66  GTLVLAVAVTVIEVALIVSVMLTSGPEKAALARDTVFAAVMIVCNGIVGICLLVGGIRHR 125
           G+L+L+++V ++EV+LI ++M T G    AL RDT+F+ +MIV  G+VG+ LL+GG +  
Sbjct: 75  GSLILSLSVVILEVSLISALMAT-GDAAPALMRDTLFSIIMIVTAGLVGVALLLGGRKFA 133

Query: 126 EQDFQSRGAAAALAVLASLSVLTLVMPNYTTTSVGPILSSSQLAFAGVSSLVLYGVFVFV 185
            Q     G    L  +  L+V+ LV+P           S+ Q  F  + S  +YGVF+ +
Sbjct: 134 TQYVNLGGIKQYLMAIFPLAVIVLVLPAALPAGN---FSTLQALFVAMISAAMYGVFLLI 190

Query: 186 QTVRHRDYFLAGTPDE---DVHAAPPSAGQALAAGGLLLVCLVAVVLLAKVLSPVVETAV 242
           QT  H+  F+    DE   D H  P S    L     L+V LV V+ + K  +  +E+ +
Sbjct: 191 QTKTHQSLFIYEHEDEGEEDGHGKP-SLKSNLTHTLWLIVHLVLVIAVTKFNANPLESLL 249

Query: 243 ENAGAPPAVVGIIIAALVLLPEGLAAVRAARADRLQNSLNLALGSALASIGLTIPTVACV 302
               AP    G ++A L+L PEGL A++A   +++Q ++NL  GS LA+I LT+P V  +
Sbjct: 250 TELNAPAQFTGFLVALLILSPEGLGALKAVLKNQVQRAMNLFFGSVLATISLTVPAVTVI 309

Query: 303 FLYTGQPLVLGIDGKETVLLVLTLIVGTLTLSSGRTTILQGAVHLSLFAAYLFL 356
              TGQ L+ G+D    V+++  LI+  ++ S+GRT +L G  HL+LF AY+ L
Sbjct: 310 ATLTGQDLIFGLDPANIVVMLAVLILCQISFSTGRTNVLNGTAHLALFCAYMML 363