Pairwise Alignments

Query, 294 a.a., LysR family transcriptional regulator from Burkholderia phytofirmans PsJN

Subject, 291 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  127 bits (318), Expect = 4e-34
 Identities = 85/283 (30%), Positives = 137/283 (48%), Gaps = 4/283 (1%)

Query: 6   LADFNAVALHGGFGPASRALDRPKATLSRRVAELEETLGVRLIERGSRTLRLTEEGLALH 65
           +++F AVA    F  A++ L+   A +SR++  LE  LG +L  R +R + LTEEG   +
Sbjct: 7   ISEFVAVAEAENFTLAAQRLNVSTAHVSRQIGALENRLGTKLFYRTTRKVSLTEEGTIYY 66

Query: 66  ERTRGLMAEIQEAGEAVASRAPVPRGRLRISAPVVFAHVVLVRIATRFALAYPQVELEVV 125
              R L   ++EA  A+      P+G ++++APV +    ++ +   F + YP VE  V 
Sbjct: 67  RHCRQLQTGLEEAERAITDLKDSPQGLVKLTAPVAYGEKFIMPLLNDFMVQYPSVECNVD 126

Query: 126 AEDRVVDPVEDGYDLVIRINPAPDQQLVGRRILGDELLLVAAPTMSIPPWAAGDAAALAV 185
             +R +D +E GYDL IR+    D  L+ + +      + A+P+        G+   L+ 
Sbjct: 127 LTNRTLDLIEGGYDLAIRLGKLADSSLMAKPLSSRTHYVAASPSY---VEKYGEPHTLSE 183

Query: 186 PAVVSVAASANAIWSVRTESGPRSLAPMPVLRLSSLLMVRNAVLDGVGAAMLPKLLVEQD 245
               +     +  W        R+      L  +S   +R+A L G+G   LP   +E+D
Sbjct: 184 LNQHNCLIGNHNYWRFIEHGRERNFKVRGKLICNSGYALRDAALKGIGIVQLPDYYIEED 243

Query: 246 VAAGRLVCWGVADGPPVE-IWALYNSRRLLSAKVRAFMDLLRD 287
           + AGRL+ +        E IWALY   R LSAKVR  +D L +
Sbjct: 244 IHAGRLISFLDTHREAKEGIWALYPQNRHLSAKVRVLVDYLAE 286