Pairwise Alignments

Query, 460 a.a., sensor histidine kinase from Burkholderia phytofirmans PsJN

Subject, 459 a.a., histidine kinase from Herbaspirillum seropedicae SmR1

 Score =  198 bits (503), Expect = 4e-55
 Identities = 139/450 (30%), Positives = 226/450 (50%), Gaps = 9/450 (2%)

Query: 5   SLRGRLLWWLLLPLAAFVSISGVISYRNAQTTADLVQDNALLSSMRIIGEDIDWDNGNVS 64
           S+R  LL WL+ PL     I   ++Y  A   A    D  L+ S   +   +       +
Sbjct: 7   SIRRDLLKWLIAPLLLVNLIGAGLTYWLAWLPAQHAFDQNLMDSTWGLYAQVRHRQERTT 66

Query: 65  IQIPPAALELFESPEQDSVFYRVEASGHRLVEGSLELPLPPQTG--DKPTLYMTRLEDGR 122
            ++   A ++  S   D+ F+ V  +  ++V G    P  P +   D+P  Y   +  G 
Sbjct: 67  AELTQQAEQILRSNHSDTTFFAVRNTEGQIVVGDKGFPQLPASDVFDRPINYDGEMR-GE 125

Query: 123 AVRAVAYVRQLYDTGRTEEVIVAVAKTEGSRDAMVWRLLRPQLFGEVLTLVLAMVFVYLG 182
            VR  A   ++    +   + VAVA+T   RD   + +L   L  +      ++  V + 
Sbjct: 126 PVRIAAMQVRV----KNGVIWVAVAETIRKRDRAHYTILLSFLVLDGALTFASIFVVLVA 181

Query: 183 LTFELRPLMKVKDDVADRNPSQLQPIRVARLHVELRPIVDAINQCIARMGQQAATQRQFI 242
           +   LRPL  ++ ++  R+  +L  I      VEL+P++ A+N+ +AR+ +    Q+ F+
Sbjct: 182 VRRGLRPLKSLQRNLEQRDHGKLGAIDGRGAPVELQPLIVAMNELMARINKGEQAQQNFM 241

Query: 243 SDAAHQMRTPLTLLVAQIQFARQRENRDAPLAEALAGMHKSSRKLTTLTDKLLLLAQAES 302
           +D AHQ+RTPLT L  Q++    +       A +LA M+ S  ++   + +LL LA++E 
Sbjct: 242 ADVAHQLRTPLTGLKLQLELLHDKHQDQPDTARSLAMMNSSVERMIRQSRQLLALARSEP 301

Query: 303 AAPVSA-CERVDLSALIAGVLEELIAFAQSREIDLGAELEDGMVVTGDEALTAALVTNLV 361
               S   E + L  L+   ++  I  A  + IDLG +L    +  GD  L + L+ NL+
Sbjct: 302 GLFESRKLEELSLDKLVEESVQHFIEEADKKRIDLGFDLRPARL-RGDRFLLSDLIDNLI 360

Query: 362 DNALRYTQAGGRVTVQTTRLNDIAIVRVIDNGPGIKPDARARVFERFYRASSHADGTGLG 421
           DNA+RY+   G VTV+     D  ++ V D+GPGI P+ R  +F+RFYRA+    G+GLG
Sbjct: 361 DNAVRYSPPHGTVTVRCLEEQDATVLSVEDSGPGIAPEHRELIFDRFYRANDKVAGSGLG 420

Query: 422 LPIVREIAHRQGGTVTLESGEDGIGFVATV 451
           L IVREIAH  GG ++++  E G G + TV
Sbjct: 421 LAIVREIAHDHGGVISVDCKEQGQGTIFTV 450