Pairwise Alignments

Query, 477 a.a., hypothetical protein from Burkholderia phytofirmans PsJN

Subject, 287 a.a., TPR repeat from Synechococcus elongatus PCC 7942

 Score = 50.8 bits (120), Expect = 6e-11
 Identities = 38/145 (26%), Positives = 62/145 (42%), Gaps = 3/145 (2%)

Query: 311 HRIDDALDALRAGAREKSKTAENLRLLGDVLLHANRYSEALDAFKQADKMKPDSVDNLHD 370
           +++D A+ AL    +   +    L  LG        YSEA    ++   +KPDS   L D
Sbjct: 90  NQLDPAIAALEKAQKLSPREPAILFALGSARFRQGNYSEAASFLQRGLAIKPDSSGALFD 149

Query: 371 WGEALVTVGRYDEAIEKLSRAVALRPDLAPSYAEWGRALDRKGDRSGASRKFAQALQLDA 430
            G   +   +Y  AI    +AV ++PD   +    G     +GDR+ A   + +A++L  
Sbjct: 150 LGNVYLIQKQYPPAIAAFQKAVQVKPDFWEAINNLGLVSYEQGDRNQALNYWNRAIEL-- 207

Query: 431 GTLSVRESHLARLARAAQGGNRPDA 455
            +    E  LA+     Q G   +A
Sbjct: 208 -SKDAAEPVLAKAVLVYQQGQTEEA 231



 Score = 47.8 bits (112), Expect = 5e-10
 Identities = 47/172 (27%), Positives = 80/172 (46%), Gaps = 2/172 (1%)

Query: 264 WALAGKAWLLANQGLSKEAEQQTREALTVYQHSAVLHASLGIALEQQHRIDDALDALRAG 323
           W +   A L  NQ     A  +  + L+  +  A+L A LG A  +Q    +A   L+ G
Sbjct: 79  WLVLADASLRLNQLDPAIAALEKAQKLSP-REPAILFA-LGSARFRQGNYSEAASFLQRG 136

Query: 324 AREKSKTAENLRLLGDVLLHANRYSEALDAFKQADKMKPDSVDNLHDWGEALVTVGRYDE 383
              K  ++  L  LG+V L   +Y  A+ AF++A ++KPD  + +++ G      G  ++
Sbjct: 137 LAIKPDSSGALFDLGNVYLIQKQYPPAIAAFQKAVQVKPDFWEAINNLGLVSYEQGDRNQ 196

Query: 384 AIEKLSRAVALRPDLAPSYAEWGRALDRKGDRSGASRKFAQALQLDAGTLSV 435
           A+   +RA+ L  D A         + ++G    A R   QAL  D+  +S+
Sbjct: 197 ALNYWNRAIELSKDAAEPVLAKAVLVYQQGQTEEAVRLAQQALGKDSQYVSL 248