Pairwise Alignments

Query, 292 a.a., LysR family transcriptional regulator from Burkholderia phytofirmans PsJN

Subject, 306 a.a., transcriptional regulator GcvA from Vibrio cholerae E7946 ATCC 55056

 Score =  172 bits (435), Expect = 1e-47
 Identities = 103/293 (35%), Positives = 166/293 (56%), Gaps = 13/293 (4%)

Query: 6   PLNALRAFESSARHLSFTRAAFELNVTQAAVSQQVRTLEERLGTALFKRLPRGLAMTDEG 65
           PLN+L+ FE++ARHLSFTRAA EL VTQAAVS Q++ LEE LG  LF+R  R L +T+EG
Sbjct: 7   PLNSLKVFEAAARHLSFTRAAEELFVTQAAVSHQIKALEEFLGLKLFRRRNRSLLLTEEG 66

Query: 66  ----LALRPVLTDAFDRIEAVLKQFEGGHFHEVLTVGVVGTFAVGWLMPRLKSFRDAHPF 121
               L ++ + +   +  + +L++ E G     LT+ +  +FA+ WL+PRL  F    P 
Sbjct: 67  QSYFLDIKDIFSSLAEATDKLLERSEKG----ALTISLPPSFAIQWLVPRLADFNQQEPD 122

Query: 122 VELRLLTNNNLVDLATEGLDFAIRFGDGTWPGSLATRLLDAPLALLCTPEIA---ERLTK 178
           +++R+   +      T+ +D AI +G G+WPG  A +L    L  LC+P +    + + K
Sbjct: 123 IDVRIKAVDMDEGSLTDDVDVAIYYGRGSWPGLRADKLYQEFLIPLCSPALLLGNKPMEK 182

Query: 179 PEDLAGETLLRSYRTDDWMSWFSAAGIPPRPI-RGPVFDSSRLMVEAAMQGAGIALAPAL 237
             DLA  TLL      DW  +    G+    +  GP+F  S ++++AA  G G+AL   +
Sbjct: 183 LSDLAYHTLLHDTSRKDWKQFAKENGLDNVNVNHGPIFSHSTMVLQAAAHGQGVALGNNV 242

Query: 238 MFDHEINTGRLVRPFD-VEVHAGSYWLTWLKGKPMTPAMLLFNQWIIKEASAQ 289
           +   EI+ GRL+ PFD V +   ++++   + +     +  F  W++K+A ++
Sbjct: 243 LAQPEIDAGRLIAPFDEVLMTNNAFYVVCHEKQADMGRIATFRDWMLKKARSE 295