Pairwise Alignments

Query, 1018 a.a., peptidase C39 from Burkholderia phytofirmans PsJN

Subject, 1000 a.a., cyclic nucleotide-binding domain (cNMP-BD) protein from Synechococcus elongatus PCC 7942

 Score =  426 bits (1094), Expect = e-123
 Identities = 251/730 (34%), Positives = 399/730 (54%), Gaps = 11/730 (1%)

Query: 291  DLQSKPEFGEKVIKRFALVEQAEEMDCGAACLAMVCRHYSIPMTLGKLRELANVT---TQ 347
            DL +    G +  ++F +    + +    ACL M+ R   IP    +++ +        +
Sbjct: 273  DLSADLYDGSQRSQKFPVERGNDPVSEAQACLKMIARSLKIPFRRDQVQRVIEEQYRRLK 332

Query: 348  GATLDSLARAGESLGFTARGVQCTFDSLRGFDLPFIVHWEGYHYVVVYGLSKEYVWVADP 407
              +L  LA   E     ++ +Q     L    LP ++ WE  H  V+Y +    +  ADP
Sbjct: 333  SISLQELAVLLEMQALRSQILQLRLVDLPRVPLPALIAWEEGH-AVLYAVDATSITFADP 391

Query: 408  AVGFKKMTVEDFERGW--SGTCLLFTGGPHLLQMSAARSPWIRFVGYLKPYKKILGHLFL 465
              G   +++ +F++ W  +GT LL T      Q       W  F   ++ Y+  L  + +
Sbjct: 392  RQGLITLSLAEFQQRWGNAGTILLATK-TQFTQSQRFGLSW--FWPSIQRYRVRLIEVLI 448

Query: 466  ATFVIQVLGVIPPLIIQNILDGVIVHQNVSLLHLLIGGLIISNVFSQLMSSIRAYLANFM 525
            A+ V+Q+  +  PLIIQ ++D VI   +++ L+     L+I  VF  L+SS+R YL    
Sbjct: 449  ASLVVQLFTLANPLIIQQVIDKVIGQGSLNNLNSFAVLLVILGVFQGLLSSLRTYLFADT 508

Query: 526  VRNMDFAMMSQFFKHTMSLPFSFFAKRKTGDIFARFQENQTIRAFLTESTVTTALNLLMV 585
               +D  + S      + LP  +F +R  G++ +R QE + IR+FLT + +TT ++ +  
Sbjct: 509  TNRIDLKLGSDIIDRLLKLPLRYFERRPVGELSSRVQELEKIRSFLTGTALTTVMDAMFS 568

Query: 586  FIYFTIMFVYNVKMTLVLIAFVIPIMALTAIATPKIKGYAREVFTASTESKSFLMEALAG 645
             IY  +M VY+  +TLV ++ V   +A+T  A+P ++   RE    + E++S L+E L+G
Sbjct: 569  VIYILVMLVYSWFLTLVALSTVPIFVAITFFASPVVRRQLREKAERNAETQSQLVEVLSG 628

Query: 646  VETIKGMGIERPVRLRWEKKYAKALEVQYRAHAFNILVGLGSQLLNSATTIAILWVGANL 705
            ++T+K   IE   R +W+++YA+ +   +R    +      +   N  + + +LWVG  L
Sbjct: 629  IQTVKAQNIELKARWQWQERYARYIAAGFRNINTSTAASSLTNFFNQLSGLLVLWVGVYL 688

Query: 706  VLAREMTIGQLIAFNAFMGSVLGPLMGLVGLWSMLNDAGVAMERLGDVLDIEPEQKPQDL 765
            V   ++++GQLIAF    G V  PL+ L  LW    +  +++ERL D++D  P++   D 
Sbjct: 689  VFDNQLSLGQLIAFRIISGYVTQPLLRLAQLWQNFQETALSLERLADIVDT-PQESDDDD 747

Query: 766  PSRVMLPELQGEISLSGVYFRYGENDSAYVLENISFDIKPGELVAIVGRSGSGKTTLAKL 825
              ++ +P + G++    + FR+GE      L N++ +I  GE V IVG+SGSGK+TL KL
Sbjct: 748  QGKIPMPMINGKVEFRNLSFRFGEQGPLQ-LSNVTLEIPAGEYVGIVGQSGSGKSTLMKL 806

Query: 826  LVGFYTPTEGKMTIDGYDLGVVDKAYYRAQIGYVMQSNLLFSGTISENIASGDDAPDRRR 885
            L   Y+P EG++ IDGYD+  V+    R QIG V Q +LLF GT+ ENI+          
Sbjct: 807  LPRLYSPLEGEILIDGYDISKVELYSLRRQIGIVPQDSLLFQGTVEENISLTKPNATTDE 866

Query: 886  IEEVAKMADAHGFISKMPLGYEQIVGERGIGLSGGQIQRLCIARALYHDPRLLVFDEATS 945
            I   AK A AH FI  +PLGY   VGERG  LSGGQ QR+ IAR +  +P+LL+ DEATS
Sbjct: 867  IITAAKAAGAHDFIMTLPLGYNTRVGERGGALSGGQRQRIAIARTVLQNPQLLILDEATS 926

Query: 946  ALDSQSESNILGNMHDILKGRTAVIIAHRLSTIMRADKILVLYEGAIVEQGRHDELIQRG 1005
            ALD  +E  +  N+    +G+T   I HRLST+  AD+I+V+ +GA+VEQG HDEL++  
Sbjct: 927  ALDYDTERQVSINLQQHFRGKTVFFITHRLSTVRHADRIIVMDKGAMVEQGSHDELMELR 986

Query: 1006 GMYYQLVQKQ 1015
            G Y+ L ++Q
Sbjct: 987  GRYFCLYRQQ 996