Pairwise Alignments

Query, 790 a.a., hypothetical protein from Burkholderia phytofirmans PsJN

Subject, 633 a.a., TPR repeat from Synechococcus elongatus PCC 7942

 Score =  195 bits (496), Expect = 6e-54
 Identities = 141/499 (28%), Positives = 240/499 (48%), Gaps = 9/499 (1%)

Query: 245 EELESRTVLADTLRLKGLPAETEQECRKILAINPDYAEAQRIFGMSLVHQGRVAEGLAAA 304
           + LE    +A + +  G   +T Q C +IL+++ ++ +A+ +    L  +G   E     
Sbjct: 109 QNLEILYKVACSFKELGQLEKTGQVCSQILSLDDNFWQAKLLAAEILRIKGYSGEAKVLV 168

Query: 305 RRAIELAPNNSTAYSTLGVLLLDLGFVSEAEKEFRAALE--KDPKDHIAANNFLFTLSHN 362
              I+  P     ++ LG+  +DL    EA   F  A +    P+  I  +N+LF  S  
Sbjct: 169 LELIDQQPTVGKFWNELGINEVDLAHEDEALSAFSKAEQYVSGPEKLIIGSNYLFEFSSG 228

Query: 363 PEIDHGTLFAEHTNFARQHEDPVRAQWPRHVNKRSPDRKLKIGLVSGDLFRHAVASYLLP 422
                  L A      +  +D   +      N    + K  I  +SGD   H+V+ ++  
Sbjct: 229 LRTAKDILDAHLLWNKKYCKDQGGSFQSSKFNYLKSNDKKNIAYLSGDFKTHSVSYFIEG 288

Query: 423 IMEHLAKDPNLSLHVYNNHIAEDDYTQLLRNCADEWHQITGMPDAQLANKIRDERIDILF 482
           I+E+ ++D    + + N    ED+ T+  +  AD W  +        A  ++   IDIL 
Sbjct: 289 ILENHSRDAFNIILLSNTQ--EDEKTKKFKELADIWIDLKLTNFETAAQIVKRLNIDILI 346

Query: 483 DLSGHTGRNRLLTFARKPAPIQVTWMGYPGTTGLSAMDYYLADKYGVPFGPAENQFSEKI 542
           +LSGHT  N+L   + + AP+Q T++GY  TTGLS +DY++ D    P    E   +E I
Sbjct: 347 ELSGHTNGNKLNLLSSRLAPVQATYLGYFATTGLSTIDYWITDNVVHPAHTVELA-TETI 405

Query: 543 VHLPSS-ATFLPEQSAPPVNILPAMHNGYVTFGSFNRLNKLRRDVIALWAELLRAQPTAK 601
             LP     + P   +P +   P + NGY+TFGSF    K+    I LW+ +L   P ++
Sbjct: 406 FRLPRCYLAYTPPPQSPSIAESPVIKNGYITFGSFVASRKISDYSILLWSSILSEIPNSQ 465

Query: 602 MLLG--AIATDEDEQLLIDWFAGEGIERERLMFRR-RSSIPVYLQQHFHVDICLDTFPYT 658
           +L+   +  +      LI+ F+  GI  +R+ F   + ++  +L  +  VDI LDT+P +
Sbjct: 466 LLIKNRSCVSPLYRSELIEKFSLCGISSQRINFNEAKLNLEDHLALYNKVDIALDTYPAS 525

Query: 659 GSTTVLNSLWMGVPTLTIAGDTLASRAGTTWMSHVGLDDFVVANKEEFVARGVALASDLP 718
           G TT + +LWMGVP LT  G+ + SR   + +  + L +++    EE++ +G+     + 
Sbjct: 526 GCTTTVEALWMGVPVLTRLGELMVSRNSASLLHALNLQNWIAETDEEYIDKGIKFTQSIE 585

Query: 719 ALADIRTGLRERCAASAAF 737
            LA +R G+RER   S  +
Sbjct: 586 QLALLRQGMRERFMQSELY 604



 Score = 29.3 bits (64), Expect = 7e-04
 Identities = 22/58 (37%), Positives = 26/58 (44%), Gaps = 2/58 (3%)

Query: 192 KGNVVEAVKLARSLTQRFPADGNSWRWLGIALHRLGRYDEALAPLRKAAELF--PEEL 247
           KG   EA  L   L  + P  G  W  LGI    L   DEAL+   KA +    PE+L
Sbjct: 158 KGYSGEAKVLVLELIDQQPTVGKFWNELGINEVDLAHEDEALSAFSKAEQYVSGPEKL 215