Pairwise Alignments

Query, 286 a.a., flagellar motor protein MotA from Burkholderia phytofirmans PsJN

Subject, 289 a.a., chemotaxis protein MotA (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  220 bits (561), Expect = 2e-62
 Identities = 114/286 (39%), Positives = 182/286 (63%), Gaps = 3/286 (1%)

Query: 1   MLIFVGTLVTLLSVFGGYALEGGHLGALLQ--PVEVLMIVGAGVGAFILGNGMKTIKATL 58
           M+  +G +V  + VFGGY   GG +G +L+  P E+ MI GA VGAF++GN M  IK TL
Sbjct: 1   MIGIIGIVVVFVMVFGGYLAAGGKMGIILKSLPFEMTMIGGAAVGAFVIGNDMSGIKHTL 60

Query: 59  RVIPTLFKGAKYNKDVYMELMALLYVLLAKARKEGTLTLEADIDDPSKSPIFTQYPKILA 118
           + +  +FKG  +    Y +L+ LL+ L+  AR +  + LE  I+DP+ S IF++YPKI+A
Sbjct: 61  KDVKKVFKGPTWLAQDYKDLLCLLFELIRLAR-QNPVGLEEHIEDPAASNIFSKYPKIMA 119

Query: 119 DHHIIEFLTDYLRLMVGGNMNAFEIESLMDEEIETHHQEGEAPAHALNKVGDAMPAFGIV 178
           D   I+ + D +R       +  ++E ++++ IE++H+     +HAL  V D +PA GIV
Sbjct: 120 DREAIDLIADTMRSAAMNYDDPHQVEEVLEKRIESNHEHAMHGSHALQTVADGLPALGIV 179

Query: 179 AAVMGVVHTMASADKPPAVLGEMIAQALVGTFLGILLSYGLIGPLASVAEQRVTESTKMF 238
           AAV+GV+ TM S D+PP +LG++I  ALVGTFLG+ L+YGL+GP ++  +  V E    +
Sbjct: 180 AAVLGVIKTMGSIDQPPEILGKLIGGALVGTFLGVFLAYGLVGPFSAKVKSVVEEDAHFY 239

Query: 239 QCIKVTILASLNGYAPAIAVEFGRKVLFSTERPSFAELEEHVRRVK 284
             I+  ++A+L+ +     +E GR+   S  RP+F++LEE ++++K
Sbjct: 240 LLIREVLVANLHKHTVNNCIEVGRQNTPSHIRPTFSDLEEALKQLK 285