Pairwise Alignments

Query, 335 a.a., flagellar motor protein MotB from Burkholderia phytofirmans PsJN

Subject, 349 a.a., OmpA/MotB from Pseudomonas syringae pv. syringae B728a

 Score =  220 bits (561), Expect = 4e-62
 Identities = 126/327 (38%), Positives = 191/327 (58%), Gaps = 18/327 (5%)

Query: 4   DKDRAIVVKRAAPKKAGHHGGAWKLAYADFMTAMMAFFLLMWLLSSASTVQLKGIADYFN 63
           + ++ I++KR      GHHGGAWK+A+ADF TAMMAFFL++WL+SSA+  QL  +A YF 
Sbjct: 2   ENNQPIIIKRVKRFGGGHHGGAWKIAFADFATAMMAFFLVLWLMSSATPEQLLAVAGYFK 61

Query: 64  QPLKITLWGGDRSAEDSSILKGGGRDISTDAQGVTRSSEGSNNRAEHSAAHGSEDSIKQL 123
            P+     G   S     I  GG  ++S +    T + E     +  +    +E++    
Sbjct: 62  DPV-----GFSDSGSPYVIDLGGSPEMSPNQ---TLNPEVQTTPSPDTVPLEAENA---- 109

Query: 124 QGELERREQVRLHDLQVKLMAAIEANPVLRQFKQQIRIDSTLTGLRIEIVDSQKRPMFAT 183
           + + E  EQ RL  L  +L   +E NP L++FK QI  + T  GLRI+I+D++ RPMF +
Sbjct: 110 ETKAEAVEQERLEMLLQELQTKVEENPQLQKFKDQILFEITQDGLRIQIMDAENRPMFDS 169

Query: 184 AKDQVEPYMRDILREIGHTLNDVPNRIIVQGHTDAAQYAGGEKGYSNWELSADRANASRR 243
              +++PY  DIL  +  T+  VPN++ + GHTDA  +  G  G+ NWELSA+RANA+RR
Sbjct: 170 GSARLKPYFEDILLALADTIKSVPNKVSISGHTDATPFV-GSGGFGNWELSANRANAARR 228

Query: 244 ELIGGGMDEAKVMRVLGLASTQNLNKADPMDPENRRISIIVLNRKSEEALNHDDSTTTTL 303
            L+ G   +++V RV+G AS+   ++ +P +P NRRI I+VL +K++  +  D ++    
Sbjct: 229 ALVAGTYPDSQVARVVGYASSALYDRQNPTNPINRRIDIVVLTKKAQHRIEGDQNSGGAP 288

Query: 304 SDDAAGSKPLLQKLAQPVTVAPKLPAA 330
           +  AA + P     A  V  AP  PAA
Sbjct: 289 ATPAAPTAP-----APAVPAAPGAPAA 310