Pairwise Alignments

Query, 335 a.a., flagellar motor protein MotB from Burkholderia phytofirmans PsJN

Subject, 347 a.a., flagellar motor protein from Pseudomonas aeruginosa PA14

 Score =  231 bits (589), Expect = 2e-65
 Identities = 132/328 (40%), Positives = 188/328 (57%), Gaps = 8/328 (2%)

Query: 4   DKDRAIVVKRAAPKKAGHHGGAWKLAYADFMTAMMAFFLLMWLLSSASTVQLKGIADYFN 63
           D ++ I+VKR     AGHHGG+WK+A+ADF TAMMAFFL++WLLSSA+  Q K I+ YF 
Sbjct: 2   DNNQPIIVKRVKRYAAGHHGGSWKIAFADFATAMMAFFLVLWLLSSATPEQKKAISGYFQ 61

Query: 64  QPLKITLWGGDRSAEDSSILKGGGRDISTDAQ-GVTRSSEGSNNRAEHSAAHGSEDSIKQ 122
            P+     G   SA    I  GG    + D        ++  +N +  S     + +  Q
Sbjct: 62  DPI-----GFSESASPYVIDLGGTPTPAPDKTLNPQVQAQPDSNESRISPEQDHQVNADQ 116

Query: 123 LQGELERREQVRLHDLQVKLMAAIEANPVLRQFKQQIRIDSTLTGLRIEIVDSQKRPMFA 182
            +   E+ E+ RL  L  +L   ++ NP+L+ FK QI  + T  GLRI+IVD+  RPMF 
Sbjct: 117 AENLAEQVERERLALLLQELQNKVDENPMLKDFKDQIHFEITRDGLRIQIVDAANRPMFD 176

Query: 183 TAKDQVEPYMRDILREIGHTLNDVPNRIIVQGHTDAAQYAGGEKGYSNWELSADRANASR 242
               +++PY  DIL  +  T+  VPN+I + GHTDA  YA G   + NWELSA+RANA+R
Sbjct: 177 LGSARLQPYFEDILLAMAETIRQVPNKISISGHTDAKPYA-GNGDFGNWELSANRANAAR 235

Query: 243 RELIGGGMDEAKVMRVLGLASTQNLNKADPMDPENRRISIIVLNRKSEEALNHDDSTTTT 302
           R L+ GG  E ++ +V+G AS +  +  DP++P NRRI I+VL RK+++A+  +      
Sbjct: 236 RALVAGGYPEGQIAQVVGYASARLFDDKDPLNPVNRRIDIVVLTRKAQKAIEGETGAPEA 295

Query: 303 LSDDAA-GSKPLLQKLAQPVTVAPKLPA 329
            +  AA G +P     A      P LPA
Sbjct: 296 SAPAAAPGEQPKPAAEAPAAGAQPSLPA 323