Pairwise Alignments

Query, 335 a.a., flagellar motor protein MotB from Burkholderia phytofirmans PsJN

Subject, 301 a.a., Flagellar motor protein from Sphingomonas koreensis DSMZ 15582

 Score =  168 bits (425), Expect = 2e-46
 Identities = 103/290 (35%), Positives = 155/290 (53%), Gaps = 11/290 (3%)

Query: 7   RAIVVKRAAPKKAGHHGGAWKLAYADFMTAMMAFFLLMWLLSSASTVQLKGIADYFNQPL 66
           + IV K       GHHGGAWK+AYADF+TAMMAFFLLMWLL + +  Q K +ADYF    
Sbjct: 14  KIIVKKIFVEGGGGHHGGAWKVAYADFVTAMMAFFLLMWLLGATNEKQRKALADYFAP-- 71

Query: 67  KITLWGGDRSAEDSSILKGGGRDISTDAQGVTRSSEGSNNRAEHSAAHGSEDSIKQLQGE 126
             TL    +++  S+ L GG      D         G+ +    + A G +      QG 
Sbjct: 72  --TLIEFKQNSAGSNGLLGGDAMQGKDNYPTMAKQTGTRSMTIPAGAQGGDFVGTGEQGS 129

Query: 127 LERREQVRLHDLQ--VKLMAAIE----ANPVLRQFKQQIRIDSTLTGLRIEIVDSQKRPM 180
           L+ +E +   D Q   K+ A IE    + P L +  +Q+R   T  G+RI+++D     M
Sbjct: 130 LKNKEAMDAQDRQGFAKMKAEIERKIKSTPGLTKLGKQVRFVPTREGMRIDLMDDADYSM 189

Query: 181 FATAKDQVEPYMRDILREIGHTLNDVPNRIIVQGHTDAAQYAGGEKGYSNWELSADRANA 240
           FA       P    ++  +  ++ D  N ++++GHTD+  Y G  +  +NW LS+ R+  
Sbjct: 190 FALGTTNFVPEAAKLVELVARSIADSQNPLMIRGHTDSLGY-GDPRNMNNWMLSSARSEE 248

Query: 241 SRRELIGGGMDEAKVMRVLGLASTQNLNKADPMDPENRRISIIVLNRKSE 290
           +RR L+  G+ E +  R+ G+A  + L KA+P DP NRR++I +L RKS+
Sbjct: 249 TRRRLVAAGVPEPRFERIEGVADREPLIKANPADPRNRRVAITLLYRKSK 298