Pairwise Alignments

Query, 335 a.a., flagellar motor protein MotB from Burkholderia phytofirmans PsJN

Subject, 321 a.a., flagellar motor protein MotB from Dyella japonica UNC79MFTsu3.2

 Score =  229 bits (585), Expect = 5e-65
 Identities = 139/330 (42%), Positives = 191/330 (57%), Gaps = 28/330 (8%)

Query: 9   IVVKRAAPK-KAGHHGGAWKLAYADFMTAMMAFFLLMWLLSSASTVQLKGIADYFNQPLK 67
           IVV+R   +   GHHGGAWK+AYADF+TAMMAFFL+MWL+ + +  Q   I++YF  P  
Sbjct: 10  IVVRRVKKRGHGGHHGGAWKVAYADFVTAMMAFFLVMWLIGAGTREQRAAISEYFKNPSM 69

Query: 68  ITLWG--------GDRSAEDSSILKGGGRDISTDAQGVTRSSEGSNNRAEHSAAHGSEDS 119
                        G   A  S I  GG +D+S    G    S+G         A  S D 
Sbjct: 70  TQGTATMAPPGQTGPGGASTSMIKLGGAKDLSRSPGG---KSQGG--------ATASVDP 118

Query: 120 IKQLQGELERREQVRLHDLQVKLMAAIEANPVLRQFKQQIRIDSTLTGLRIEIVDSQKRP 179
            K+++ E  R+E+ RL +L  +L AAI+++  L  FK Q+ +D T  GLRI+IVD Q RP
Sbjct: 119 -KEIEKEARRQERARLEELMQQLQAAIQSSQALAPFKDQLLLDITPEGLRIQIVDKQNRP 177

Query: 180 MFATAKDQVEPYMRDILREIGHTLNDVPNRIIVQGHTDAAQYAGGEKGYSNWELSADRAN 239
           MF     ++ PY   IL E+   +N VPNRI + GHTD A Y   +  Y NWELSADRAN
Sbjct: 178 MFDLGSARLRPYTATILEELSGFINRVPNRISLSGHTDDAPYT-SDHHYGNWELSADRAN 236

Query: 240 ASRRELIGGGMDEAKVMRVLGLASTQNLNKADPMDPENRRISIIVLNRKSE-EALNHDDS 298
           A+RR L+ GG+ E K+ RV+GLA++   ++A+P DP NRRISIIV+N+++E  +L+ +  
Sbjct: 237 AARRALLDGGLAEDKIARVVGLAASVPFDRANPGDPINRRISIIVMNKQAEASSLSQEAG 296

Query: 299 TTTTLSDDAAGSKPLLQKLAQPVTVAPKLP 328
               +S +A      L  +A  V   P  P
Sbjct: 297 PVVAISKEAT-----LPSVAPLVLAPPSAP 321