Pairwise Alignments

Query, 335 a.a., flagellar motor protein MotB from Burkholderia phytofirmans PsJN

Subject, 298 a.a., chemotaxis motB protein from Caulobacter crescentus NA1000

 Score =  179 bits (455), Expect = 6e-50
 Identities = 114/302 (37%), Positives = 170/302 (56%), Gaps = 25/302 (8%)

Query: 1   MSKDKDRAIVVKRAAPKKAG---HHGGAWKLAYADFMTAMMAFFLLMWLLSSASTVQLKG 57
           M+ + ++ I++K+   KK G   HHGGAWK+AYADF+TAMMAFFLLMWLL++ S  Q +G
Sbjct: 1   MAVNSEQPIIIKKV--KKGGGHGHHGGAWKVAYADFVTAMMAFFLLMWLLNTTSPEQKQG 58

Query: 58  IADYFNQPLKIT--------LWGGDRSAEDSSILKGG---GRDISTDAQGVTRSSEGSNN 106
           IADYF  P  I+        + GG    +D +   G     + ++ +AQ VT+ ++ S  
Sbjct: 59  IADYF-APASISSTTSGSGGILGGTSLGDDGAKADGKLSVVQQMAPEAQDVTKEAQSSET 117

Query: 107 RAEHSAAHGSEDSIKQLQGELERREQVRLHDLQVKLMAAIEANPVLRQFKQQIRIDSTLT 166
               SA      S + L+  L ++EQ         L  +++  P L +  +QI ID T  
Sbjct: 118 ANLDSA------SEQALRDALAKKEQDSFASAAQSLRQSLQDMPELAELSKQILIDQTPE 171

Query: 167 GLRIEIVDSQKRPMFATAKDQVEPYMRDILREIGHTLNDVPNRIIVQGHTDAAQYAGGEK 226
           GLRI++VD + R MF     +     R +LR +   +N +PNR+ + GHT A  +  G+K
Sbjct: 172 GLRIQLVDQEGRSMFKENSREPNDRARVLLRAVAKVINQLPNRVTISGHTSANAF--GKK 229

Query: 227 GYSNWELSADRANASRRELIGGGMDEAKVMRVLGLASTQNLNKADPMDPENRRISIIVLN 286
              +W LSA RA+ASR+ L   G+D+ +V +V G A+++ L   DP    NRRISI++L 
Sbjct: 230 QDGDWALSAQRADASRQVLRSAGVDDDRVYQVSGKANSEPLYADDPTLAGNRRISIVLLR 289

Query: 287 RK 288
            K
Sbjct: 290 EK 291