Pairwise Alignments

Query, 657 a.a., flagellar hook-associated protein FlgK from Burkholderia phytofirmans PsJN

Subject, 686 a.a., Flagellar basal body rod protein:Protein of unknown function DUF1078 from Pseudomonas syringae pv. syringae B728a

 Score =  359 bits (921), Expect = e-103
 Identities = 233/692 (33%), Positives = 367/692 (53%), Gaps = 51/692 (7%)

Query: 3   NLINLGLSGLNAAQWGLTTTGQNISNASTPGYTIETPVYAESG----GQYTGSGYLPQGV 58
           +LI++GLSG+NA+   + T G N +N  T GY+ +  +   S     GQ  G GY+  G 
Sbjct: 2   SLISIGLSGINASSAAINTIGNNTANVDTAGYSRQQVLTTASAQIALGQ--GVGYIGTGT 59

Query: 59  STTTVTRQYSQYLTTELNNAQSSGSSLSTYNTLISQLNNLIGSPTAGIASAITSYFTGLQ 118
           + + V R Y+ YL T+L ++ +  +    Y+   S+ + L+     GI+  +  +FT +Q
Sbjct: 60  TLSDVRRIYNSYLDTQLQSSTALSADALAYSGQASKTDTLLSDSATGISVQLADFFTKMQ 119

Query: 119 NVSNNASSLATRQTAMSGAQTLVNQINAAGQQYDALRQSVNTQLTNTVSQINSYTQQIAQ 178
            ++ +A+  A R + ++ A  L  + N+   Q      +VNTQL     ++N  T  +A 
Sbjct: 120 GIATSATQSAERSSFLTQAGALSARFNSVSSQLSTQNDNVNTQLDTFTKKVNELTTTLAS 179

Query: 179 LNGQITQASTQGQPPNQLMDQRDLAVSNLSQLIGVNVVNSNGSYSVFMSNGQPLVSSGNS 238
           LN QITQAS     PN L+D R  AV  L++L+GV VV +NG++ ++   GQ LVS G S
Sbjct: 180 LNKQITQASAGNATPNTLLDSRSEAVRQLNELVGVKVVENNGNFDIYTGTGQSLVSGGTS 239

Query: 239 YNLGTAPSTGDTSELSVQY-LGQAGANPAAAPQNLPDSKIDGGTLGGLLAFRSQTLDPGE 297
           Y +  +PS  D  + +VQ   GQ         Q    S + GG++GGLL +R++ L P  
Sbjct: 240 YKMSASPSPSDPLQYNVQIAYGQT--------QTDVTSVLTGGSIGGLLRYRNEVLVPAT 291

Query: 298 AQLGAIAVSFSAQVNAQNGLGITLAGAKGGALFS-------VGGPTVYANTQNTGNASLN 350
            +LG  A+  S QVN+Q   GI   G  G  L+S       +   ++   T + G+ +LN
Sbjct: 292 NELGRTAMVLSDQVNSQMNQGIDSKGNFGSNLYSSINSADAITQRSIGKTTNSVGSGNLN 351

Query: 351 VSFANPAQPTTGDYTLAY-NGTTYTLTDNSTGSVVGS---ATNLSQPINGLNFSTTG-TM 405
           V+  + ++ T  DY + + + + +++     G  VGS   A N  +   G + S  G T+
Sbjct: 352 VTIGDTSKLTANDYEVTFSDSSNFSVRRLPNGESVGSGSLADNPPKQFEGFSVSLNGNTL 411

Query: 406 NAGDSFTVEPTRGALNSFATATTDASAIAAAAPVLGAAASSNTGTGTITQGTVTAGYTMP 465
            AGDSF V PTR   +  + A TDA  IAAAAP+   A SSN+GTG  TQ  V     + 
Sbjct: 412 AAGDSFKVIPTRTGASGISVALTDAKDIAAAAPLTATAGSSNSGTGGFTQPVVNTKSDIY 471

Query: 466 NSTTTLSYDGTGLSGFPVGSTV-TVAGSPATTYTIASA---ATVVPYSSATGATLTINNA 521
           +ST T           P+   +  V  S   +YT+  A   A +    +A G ++    A
Sbjct: 472 DSTQTADLRNALKDSTPMKLVMGAVNSSGVQSYTVIKANGGAVLDQNGNAIGGSIIQGQA 531

Query: 522 TAGQMN----------------NVSVTISGAPAAGDKFTIGPNTGATNDGRNALALSNLS 565
              ++N                 + +TISG+P A D F+IG   G ++D RNALA+  L 
Sbjct: 532 NTVKLNVGYTDTTTTPNSKTAFELQMTISGSPVANDTFSIGLTGGGSSDNRNALAVVGLQ 591

Query: 566 TAKALA---GGTVT-LTGAYANYVNNIGNQTNQIQTSSTAQSSLVTQITTAQQSVSGVNI 621
           TAK +    GG  T L+G+YA+ V+ +G   +Q +   TA +++V+Q  +++ SVSGV++
Sbjct: 592 TAKTVGVINGGVGTSLSGSYASTVSVVGTLASQSKNDVTATAAVVSQAKSSRDSVSGVSL 651

Query: 622 NEEAANLLQYQQLYQANSKVIQTAQTLFQTIL 653
           +EEA+NL++YQQ Y A+S++I+ AQT+F T++
Sbjct: 652 DEEASNLIKYQQYYTASSQIIKAAQTIFSTLI 683