Pairwise Alignments

Query, 332 a.a., flagellar motor switch protein FliM from Burkholderia phytofirmans PsJN

Subject, 342 a.a., flagellar motor switch protein FliM (RefSeq) from Shewanella amazonensis SB2B

 Score =  299 bits (765), Expect = 8e-86
 Identities = 136/323 (42%), Positives = 214/323 (66%), Gaps = 1/323 (0%)

Query: 5   EFMSQEEVDALLKGVTGETDSEAEQSDRVGVRPYNIATQERIVRGRMPGLEIINDRFARL 64
           + +SQ+E+DALL GV    + E  ++     R Y+ ++Q+RIVRGRMP LEI+N+RFAR 
Sbjct: 3   DLLSQDEIDALLHGVDDVEEEEVSEAG-ASARSYDFSSQDRIVRGRMPTLEIVNERFARH 61

Query: 65  LRVGIFNFMRRSAEISVGPVKVQKYSEFTRNLPIPTNLNLVHVKPLRGTSLFVFDPNLVF 124
           LR+ +FN MRR+AE+S+  V++ K+ E+   L +PT+LN+V  +PL+GT+L   +  LVF
Sbjct: 62  LRISMFNMMRRAAEVSINGVQMLKFGEYVHTLFVPTSLNMVRFQPLKGTALITMEARLVF 121

Query: 125 FVVDNLFGGDGRFHTRVEGRDFTQTEQRIINKLLNLVFDNYTASWKSVRPLQFEYVRSEM 184
            +VDN FGGDGRFH ++EGR+FT TE+RI+  LL ++F++Y  +W  V  ++F+Y+ SE+
Sbjct: 122 ILVDNFFGGDGRFHAKIEGREFTPTERRIVQLLLKIIFEDYKDAWAPVMDVEFDYLDSEV 181

Query: 185 HTQFANVATPNEIVIVTQFSIEFGTTGGTLHICMPYSMIEPIRDILSSPIQGEALEVDRR 244
           +   AN+ +P E+V+V  F IE    GG  HI MPYSMIEPIR++L + +Q +  + D R
Sbjct: 182 NPAMANIVSPTEVVVVNSFHIEVDGGGGDFHITMPYSMIEPIRELLDAGVQSDKQDTDMR 241

Query: 245 WVRVLSQQVQAAEVELTADLAQVPVTFEQILNMRKGDVLPINIPEHITAKVDGVPVMECG 304
           W + L  ++   EV   A + +  ++   ++ M+ GDV+P+ +PE++  K++ +P   C 
Sbjct: 242 WSQALKDEIMDVEVGFEATVVEHQISLRDVMEMQAGDVIPVELPEYVLMKIEELPTYRCK 301

Query: 305 YGIFNGQYALRVQKMISAAETMK 327
            G    Q AL++ + I   ET+K
Sbjct: 302 LGKSREQLALKICEKIPRPETVK 324