Pairwise Alignments

Query, 332 a.a., flagellar motor switch protein FliM from Burkholderia phytofirmans PsJN

Subject, 326 a.a., flagellar motor switch protein FliM (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  241 bits (615), Expect = 2e-68
 Identities = 117/281 (41%), Positives = 188/281 (66%), Gaps = 3/281 (1%)

Query: 5   EFMSQEEVDALLKGVTG-ETDSEAE-QSDRVGVRPYNIATQERIVRGRMPGLEIINDRFA 62
           + ++Q+EVDALL+G++G E +SE + Q D  G+ P+++A Q+RI+RGRMP LEI+NDRFA
Sbjct: 3   KILAQDEVDALLRGLSGGEIESETDIQHDDSGIVPFDLANQDRIIRGRMPVLEIVNDRFA 62

Query: 63  RLLRVGIFNFMRRSAEISVGPVKVQKYSEFTRNLPIPTNLNLVHVKPLRGTSLFVFDPNL 122
           RL    + N +R+  E++   + + K+ +F R+LP+PT++N+  ++PLRG ++ V D  L
Sbjct: 63  RLCTNALSNAVRKRVELNPISIDMTKFGDFMRSLPVPTSINIFKMEPLRGNAIIVVDSRL 122

Query: 123 VFFVVDNLFGGDGRFHTRVEGRDFTQTEQRIINKLLNLVFDNYTASWKSVRPLQFEYVRS 182
           VF +V+N FGG G    ++EGR+FT+ EQ I+++++++  DN   SW+ V  +  E VRS
Sbjct: 123 VFALVENFFGGSGS-QPKIEGREFTRIEQAIVDRVIHIALDNMEESWRPVHDVHLELVRS 181

Query: 183 EMHTQFANVATPNEIVIVTQFSIEFGTTGGTLHICMPYSMIEPIRDILSSPIQGEALEVD 242
           E++ QFA +  P+++V+V  F +E  +  G++ IC+PY+ IEPIR  L +  Q E LEVD
Sbjct: 182 EINPQFAAIVPPSDVVVVITFEVELDSAIGSMVICLPYATIEPIRSKLHASFQTERLEVD 241

Query: 243 RRWVRVLSQQVQAAEVELTADLAQVPVTFEQILNMRKGDVL 283
             WV  L +++    VEL     +  +T  Q+L ++ GDVL
Sbjct: 242 HAWVARLKERLMETPVELKVRFGETKITGNQLLRLQVGDVL 282