Pairwise Alignments

Query, 603 a.a., flagellar M-ring protein FliF from Burkholderia phytofirmans PsJN

Subject, 592 a.a., flagellar basal-body MS-ring/collar protein FliF from Pseudomonas sp. BP01

 Score =  360 bits (923), Expect = e-103
 Identities = 226/581 (38%), Positives = 329/581 (56%), Gaps = 52/581 (8%)

Query: 53  LSGLAQMRGNPRAPLIFAVALLVAVVAGLFLWSRAPDYKVLYSNLSDRDGGAIITALQAA 112
           L  +AQM    +  L+  +A  VA+   + LWS+ PDY+ LY +LS  D   ++  L AA
Sbjct: 28  LENIAQMPMLRQVGLMVGLAASVAIGFAVVLWSQQPDYRPLYGSLSGMDTKQVMDTLGAA 87

Query: 113 NIPYKFSDAGGAILVPAEQVHEMRLRLASQGL-PKSGSVGFELMDNQK-FGISQFAEQIN 170
           +IPY      GA+LV A+ +   RL+LA+ G+ P  G+VGFEL+D ++  G SQF E   
Sbjct: 88  DIPYNVEPNSGALLVKADDLSRARLKLAAAGVAPSDGNVGFELLDKEQGLGTSQFMEATR 147

Query: 171 YQRALEGELERTIESISSVKSARVHLAIPKPSVFVRDKEAPSASVLVNLYPGRALDEGQV 230
           Y+R+LEGEL RT+ S+++VK+ARVHLAIPK SVFVRD   PSASVLV LYPGRAL+ GQV
Sbjct: 148 YRRSLEGELARTVSSLNNVKAARVHLAIPKSSVFVRDDRKPSASVLVELYPGRALEAGQV 207

Query: 231 LAITHMVSSAVPDMPVKGVTILDQDGNLLTQLSTGSGLD--ASQLKYRQQIERSTQQRID 288
           LAI ++V+++VP++    VT++DQ GNLL++    S L     Q  Y +++E    QR+ 
Sbjct: 208 LAIVNLVATSVPELDKSQVTVVDQKGNLLSEQLQDSALTEAGKQYDYSRRMESMLTQRVR 267

Query: 289 AILAPLFGSGNAHSQVSADIDFSHSEQTSENYGPNGNPQQAAIRSQQSSSATEMSQGAAS 348
            IL P+ G+    ++VSAD+DFS  E T+E +    NP Q A+RS+QS      S     
Sbjct: 268 NILQPVLGNDRYKAEVSADLDFSAVESTAEQF----NPDQPALRSEQSVDEQRASSQGPQ 323

Query: 349 GVPGALSNQPPQPASAP---------------------------INAPNGASGVTTTPVS 381
           GVPGALSNQPP  ASAP                           ++   G   +   P  
Sbjct: 324 GVPGALSNQPPGAASAPQTTGGAATPAAAIQPGQPLVDANGQQIMDPATGQPMLAPYPSD 383

Query: 382 DRKDSTTNYELDKTVRHLERPMGGIKRLSVAVVV-NYLRVVDAKGHATMQPVTADKLAQV 440
            R+ ST N+ELD+++ H  +  G + RLSVAVVV + +++  A G+ +  P  A+ LA+ 
Sbjct: 384 KRQQSTKNFELDRSISHTRQQQGRMTRLSVAVVVDDQVKIDPATGNTSRAPWAAEDLARF 443

Query: 441 NQLVKDAMGFDQARGDSVNVVNSPFSTEVDPN-ADLPWWRTPDMIALAKQIATYLGIGAV 499
            +LV+DA+GFD +RGDSV V+N PF+ + +   AD+ +++ P    + KQ+   LG+   
Sbjct: 444 TRLVQDAVGFDASRGDSVTVINVPFAADRNEEIADIAFYQQPWFWDIVKQV---LGV-VF 499

Query: 500 ALFLYFVMVKPALRRAFPPPEPAAVAALASPDEPILLDGIPAAERMGANGTSSSVAELEG 559
            L L F +++P L       + AA  +       + LDG  A +R+   G +S       
Sbjct: 500 ILVLVFGVLRPVLNNITGGGKQAASDSDMELGGMVGLDGELANDRVSLGGPTS------- 552

Query: 560 DSELLALESAKHKYERNLEFARSIARQDPKIVATVVKNWVS 600
               + L S    YE  L   + +  +DP  VA VVK+W++
Sbjct: 553 ----ILLPSPSEGYEAQLNAIKGLVAEDPGRVAQVVKDWIN 589