Pairwise Alignments

Query, 603 a.a., flagellar M-ring protein FliF from Burkholderia phytofirmans PsJN

Subject, 565 a.a., flagellar MS-ring protein (RefSeq) from Shewanella loihica PV-4

 Score =  237 bits (604), Expect = 1e-66
 Identities = 179/591 (30%), Positives = 296/591 (50%), Gaps = 45/591 (7%)

Query: 23  GAGAAGAGQAGGAADLGGLGSNLGGNFGQRLSGLAQMRGNPRAPLIFAVALLVAVVAGLF 82
           GAG      AGG  +        GG FG    G+  +R   +  +I A+A+ +A+   + 
Sbjct: 6   GAGTTQDMLAGGVQEEH---KPSGGMFG----GVDMLR---QITMILALAICLALAVFVM 55

Query: 83  LWSRAPDYKVLYSNLSDRDGGAIITALQAANIPYKFSDAGGAILVPAEQVHEMRLRLASQ 142
           LW++ P+Y+ L   +  ++   ++  L    + Y+       + VP +Q  ++++ L+  
Sbjct: 56  LWAQEPEYRPL-GKMDTQEMVQVLDVLDKNKVNYQIDV--DVLKVPEDQYQDVKMMLSRA 112

Query: 143 GLPKSGSVGFELMDNQKFGISQFAEQINYQRALEGELERTIESISSVKSARVHLAIPKPS 202
           G+  S S    L  +  FG+SQ  E    + + E  L RTIE + SV  A+V LAIPK +
Sbjct: 113 GIDNSPSRDDYLSKDSGFGVSQRMEAARLKNSQEQNLARTIEELKSVSRAKVILAIPKEN 172

Query: 203 VFVRDKEAPSASVLVNLYPGRALDEGQVLAITHMVSSAVPDMPVKGVTILDQDGNLLTQL 262
           VF R++  PSA+V+VN   G  L + +V +I  +V+SAV  +    VT+ D +G LL   
Sbjct: 173 VFARNRSKPSATVVVNTRRG-GLGQEEVDSIVDIVASAVHGLEPTRVTVTDANGRLLNSG 231

Query: 263 S--TGSGLDASQLKYRQQIERSTQQRIDAILAPLFGSGNAHSQVSADIDFSHSEQTSENY 320
           S   GS     +L+  QQ E   + +I++IL P+ G  N  +QV  ++DF+  EQT++ Y
Sbjct: 232 SQTAGSARARRELELVQQKEAEYRSKIESILMPILGPENFTAQVDVNMDFTSVEQTAKRY 291

Query: 321 GPNGNPQQAAIRSQQS--SSATEMSQGAASGVPGALSNQPPQPASAPINAPNGASGVTTT 378
               NP   A+RS+ +  +++T  S G   G+ GALSNQPP  A+ P  A   ++   T 
Sbjct: 292 ----NPDLPAVRSEMTVENNSTGASTG---GIAGALSNQPPMEANIPQQATGTSAQEQTL 344

Query: 379 PVSDRKDSTTNYELDKTVRHLERPMGGIKRLSVAVVVNY-LRVVDAKGHATMQPVTADKL 437
           P S  K++T NYELD T+ H  + +G ++R+SV+V V++        G  T    T  +L
Sbjct: 345 PGSSHKEATRNYELDTTISHTRQQVGVVRRVSVSVAVDFKTGPAGEDGQVTRVARTEQEL 404

Query: 438 AQVNQLVKDAMGFDQARGDSVNVVNSPFSTEVDPNA------DLPW-WRTPDMIALAKQI 490
           + + +L++ A+GF+  RGD + VV  PF  ++   A      + PW WR          I
Sbjct: 405 SNIRRLLEGAVGFNTQRGDMIEVVTVPFMDQLVEEAPALAIYEEPWFWRA---------I 455

Query: 491 ATYLGIGAVALFLYFVMVKPALRRAFPPPEPAAVAALASPDEPILLDGIPAAERMGANGT 550
              +G G + L L   +V+P L+R   P       A +  DE   ++   AA+ +G    
Sbjct: 456 KLVMG-GLIILVLILFVVRPMLKRLIYPDGQKMPDAPSLGDELAEIEDQYAADTLGMLNR 514

Query: 551 SSSVAELEGDSELLALESAKHKYERNLEFARSIARQDPKIVATVVKNWVSD 601
             +      D  +L  +   HK +  ++  R++   +P++   VVK W+ +
Sbjct: 515 PDAEYSYADDGSILIPD--LHKDDDMIKAIRALVANEPELSTQVVKGWLQE 563