Pairwise Alignments

Query, 603 a.a., flagellar M-ring protein FliF from Burkholderia phytofirmans PsJN

Subject, 555 a.a., flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF) from Sphingomonas koreensis DSMZ 15582

 Score =  248 bits (633), Expect = 5e-70
 Identities = 178/540 (32%), Positives = 271/540 (50%), Gaps = 40/540 (7%)

Query: 32  AGGAADLGGLGSNLG-GNFGQRLSGLAQMRGNPRA----PLIFAVALLVAVVAGLFLWSR 86
           A   A+   L +  G G F   LS +  +   P      PLIF V L+ A     ++   
Sbjct: 4   AVSVAETAALPATTGPGGFANPLSQIRSILSQPAVKRSLPLIFMVGLIGAAALA-WMALA 62

Query: 87  APDYKVLYSNLSDRDGGAIITALQAANIPYKFSDAGGAILVPAEQVHEMRLRLASQGLPK 146
            P  +VL+++L + D  A+  AL AA+IP    D  G++ V  +  H+ R+ LA QGLPK
Sbjct: 63  TPPQRVLFASLPESDKAAVAEALSAASIPNAI-DGAGSLTVGEDDYHKARMLLAGQGLPK 121

Query: 147 SGSVGFELMDNQKFGISQFAEQINYQRALEGELERTIESISSVKSARVHLAIPKPSVFVR 206
           +   G+ L+D    G+S+  E    ++A E EL R+I  I +V  ARVHLA P+ +VFVR
Sbjct: 122 AAPGGYALLDQLPMGVSRAVEGERLRQARETELARSISEIDTVAEARVHLATPEATVFVR 181

Query: 207 DKEAPSASVLVNLYPGRALDEGQVLAITHMVSSAVPDMPVKGVTILDQDGNLLTQLSTGS 266
           DK  PSASV+V L PGR L + QV +I ++V+S+VP M  + VTI+DQ G LL++     
Sbjct: 182 DKAEPSASVIVKLQPGRTLSDAQVRSIVNLVASSVPGMKAEAVTIVDQAGALLSKSGQEG 241

Query: 267 GLDASQLKYRQQIERSTQQRIDAILAPLFGSGNAHSQVSADIDFSHSEQTSENYGPNGNP 326
               +++ ++++IE   +Q++  +L PL G+GN  ++V AD+D   S+ T E +   G  
Sbjct: 242 SAGDARIDFQRRIEDKYRQQLVQLLTPLLGAGNFTAEVQADVDLDESQATRETFDKAG-- 299

Query: 327 QQAAIRSQQS--SSATEMSQGAASGVPGALSNQPPQPASAPINAPNGASGVTTTPVS--- 381
             A +R++Q   + A      A  G+PGALSN  P P+      P G +     P +   
Sbjct: 300 --AVVRAEQGNWTGAPRDGANAPGGIPGALSNVAPAPSVVATPTPEGVTAGANQPATPAA 357

Query: 382 ----DRKDS-TTNYELDKTVRHLERPMGGIKRLSVAVVVNYLRVVDAKGHATMQPVTADK 436
                + DS   +Y+  K +       G IKRLSVAV++              +P    +
Sbjct: 358 APGMKQSDSFARSYDNAKEISVTRAAPGNIKRLSVAVLLK---------EEPGKPRGQVE 408

Query: 437 LAQVNQLVKDAMGFDQARGDSVNVVNSPFSTEVDPNADLPWWRTPDMIALAKQIATYLGI 496
           + Q++ LVK A+GF+ AR D V VV+  FST  D  ++ P +      A+  +  T + I
Sbjct: 409 IKQIDDLVKAAVGFNAARQDQVTVVSRKFSTTADAASEGPAFYESGWFAMVARNVTAVVI 468

Query: 497 GAVALFLYFVMVKPAL--------RRAFPPPEPAAVAALASPDEPILL--DGIPAAERMG 546
             + L L    +  AL        R    P   A   A+ +P    +L   G+P  ER+G
Sbjct: 469 ALLVLLLGVRPLAKALLKKRDDTNRGGALPMGGADGVAMPAPVSAEMLGAGGVPLGERVG 528