Pairwise Alignments

Query, 396 a.a., elongation factor Tu from Burkholderia phytofirmans PsJN

Subject, 394 a.a., translation elongation factor Tu (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  642 bits (1656), Expect = 0.0
 Identities = 314/395 (79%), Positives = 355/395 (89%), Gaps = 2/395 (0%)

Query: 1   MAKGKFERTKPHVNVGTIGHVDHGKTTLTAAITTVLTQKFGGEAKAYDQIDAAPEEKARG 60
           MAK KFER+KPHVNVGTIGHVDHGKTTLTAAI+ VL + +GGEAK + QID APEE+ RG
Sbjct: 1   MAKAKFERSKPHVNVGTIGHVDHGKTTLTAAISHVLAKTYGGEAKDFSQIDNAPEERERG 60

Query: 61  ITINTAHVEYETANRHYAHVDCPGHADYVKNMITGAAQMDGAILVCSAADGPMPQTREHI 120
           ITINT+H+EY+T +RHYAHVDCPGHADYVKNMITGAAQMDGAILV ++ DGPMPQTREHI
Sbjct: 61  ITINTSHIEYDTPSRHYAHVDCPGHADYVKNMITGAAQMDGAILVVASTDGPMPQTREHI 120

Query: 121 LLARQVGVPYIIVFLNKCDMVDDAELLELVEMEVRELLSKYDFPGDDTPIIKGSAKLALE 180
           LL+RQVGVP+IIVF+NKCDMVDDAELLELVEMEVRELLS+YDFPGDD P+I+GSA  ALE
Sbjct: 121 LLSRQVGVPFIIVFMNKCDMVDDAELLELVEMEVRELLSEYDFPGDDLPVIQGSALKALE 180

Query: 181 GDKGELGEVAIMNLADALDTYIPTPERAVDGAFLMPVEDVFSISGRGTVVTGRVERGVVK 240
           G+     E  I+ LA ALD+YIP PER +D  FLMP+EDVFSISGRGTVVTGRVERG+V+
Sbjct: 181 GEPE--WEAKILELAAALDSYIPEPERDIDKPFLMPIEDVFSISGRGTVVTGRVERGIVR 238

Query: 241 VGEEIEIVGIKPTVKTTCTGVEMFRKLLDQGQAGDNVGILLRGTKREDVERGQVLAKPGS 300
           VG+E+EIVGI+ T KTTCTGVEMFRKLLD+G+AG+N GILLRGTKR+DVERGQVL+KPGS
Sbjct: 239 VGDEVEIVGIRTTTKTTCTGVEMFRKLLDEGRAGENCGILLRGTKRDDVERGQVLSKPGS 298

Query: 301 INPHTHFTAEVYVLSKDEGGRHTPFFNNYRPQFYFRTTDVTGSIELPKDKEMVMPGDNVS 360
           INPHT F +EVYVLSK+EGGRHTPFF  YRPQFYFRTTDVTG+IELP+  EMVMPGDN+ 
Sbjct: 299 INPHTTFESEVYVLSKEEGGRHTPFFKGYRPQFYFRTTDVTGTIELPEGVEMVMPGDNIK 358

Query: 361 ITVKLINPIAMEEGLRFAIREGGRTVGAGVVAKIL 395
           + V LI PIAM+EGLRFAIREGGRTVGAGVVAKI+
Sbjct: 359 MVVTLICPIAMDEGLRFAIREGGRTVGAGVVAKII 393