Pairwise Alignments

Query, 241 a.a., membrane protein from Burkholderia phytofirmans PsJN

Subject, 202 a.a., OmpW family protein (RefSeq) from Dinoroseobacter shibae DFL-12

 Score = 73.6 bits (179), Expect = 3e-18
 Identities = 61/242 (25%), Positives = 103/242 (42%), Gaps = 43/242 (17%)

Query: 1   MKLKQAVTGIAALACMTTAAHAQSAGSFYVTSGWFHLAPQSSSDPLKVTSIGGSPTNITE 60
           MK     T  A +      A AQSAG +    G  ++ P S +             ++ +
Sbjct: 1   MKTHLLTTAAALVLTSAAPALAQSAGDWTFGVGIINVNPDSDNG------------SVVD 48

Query: 61  ANTGAKLDSADTIGFTAGYFVTDHIATEFVIGVPPKFDLE-GSGSLAQFGKLGQAKQWSP 119
                ++ S   +  TA YF TD+I  E +   P   D++ G G++      G+ K   P
Sbjct: 49  GTLDVEVGSDTQLSLTAEYFFTDNIGLEILAATPFTHDIDVGDGAVT-----GETKHLPP 103

Query: 120 TLLFKYYFNAPTAAFRPYLGIGVSRVSFTDEKITNSAFEANVLHGPTTVTTDSSWEPVFN 179
           T+   Y+F    + F+PY+G+G++  +F +EK +             T+  D SW     
Sbjct: 104 TVSVNYHFTQ-FSGFKPYVGVGINYTNFFEEKSSAG-----------TLELDDSWGLAAQ 151

Query: 180 AGFTYAFTQHWFAGVSISYLPLSTTAKLNTAANTPVGTLNVQSETKIKLNPIVTYVNIGY 239
            G     T+     ++  Y+ + T AKLN A    +GT        +K++P+V  +N+ Y
Sbjct: 152 IGVDIPVTERGALRLNARYIDIETDAKLNGA---DIGT--------VKIDPVV--LNVAY 198

Query: 240 RF 241
            F
Sbjct: 199 VF 200