Pairwise Alignments

Query, 557 a.a., long-chain fatty acid--CoA ligase from Burkholderia phytofirmans PsJN

Subject, 563 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) (from data) from Pseudomonas stutzeri RCH2

 Score =  545 bits (1405), Expect = e-159
 Identities = 280/556 (50%), Positives = 379/556 (68%), Gaps = 8/556 (1%)

Query: 2   DKIWLKSYPPGVPAEIDPSRYSSVGELLEEAFREHRAKPAFVCMGKEISYGELDALSRKL 61
           D  W   YP GV +EI+P  Y ++  +L+++      KPAF  +GK ++YGEL  LS   
Sbjct: 3   DNFWKDKYPVGVSSEINPDEYQNIQAVLKQSCERFADKPAFSNLGKTLTYGELYKLSGDF 62

Query: 62  AAWFQSK-GLARGARIAIMMPNVLQYPVAIAAILRAGYVVVNVNPLYTPRELEHQLKDSG 120
           AA+ Q    L  G RIA+ +PN++QYP+ +   +RAG +VVN NPLYT RE+EHQ  D+G
Sbjct: 63  AAYLQQNTDLQPGDRIAVQLPNLIQYPIVVFGAMRAGLIVVNTNPLYTAREMEHQFNDAG 122

Query: 121 AEAIILLENFAVTLQAIVRNTSIKHVVVAAMGDLMG-IKGTLVNFVVRKVKKMVPAWSLP 179
           A+A++ L N A   + ++  T IKHVV+  + D++  +K  LVN VV+ VKKMVPA+SLP
Sbjct: 123 AKALVCLANMAHLAEEVLPKTGIKHVVITEVADMLPPLKRMLVNAVVKHVKKMVPAYSLP 182

Query: 180 GHVKFNTAIAEGARQNFKPVQQGPEDVAFLQYTGGTTGVAKGATLLHRNLIANVLQSEIW 239
             VK N A+A G  +  +      +DVA LQYTGGTTGVAKGA L HRN++AN+LQ +  
Sbjct: 183 KAVKLNDALALGRGKPVREALPKSDDVAVLQYTGGTTGVAKGAMLTHRNIVANMLQCKAL 242

Query: 240 LDPVRANRKDIDQFVTVVALPLYHVFALTVCGLLTIRTGGLGVLIPNPRDIPGMIKALEG 299
           +    +N  D  + V +  LPLYH++A T   +  + +G   +LI NPRD+P MIK L  
Sbjct: 243 MG---SNLNDGSE-VLIAPLPLYHIYAFTFHCMAMMLSGNHNILISNPRDLPAMIKDLGK 298

Query: 300 YPITTIPAVNTLYNALLNSPDFHKLDFSKLIAANGGGMAVQEAVAKRWYEQTHTPIIEGY 359
           Y  +    +NTL+ AL NS DF KLDFS L     GGMA+Q A A+RW + T  PI EGY
Sbjct: 299 YRFSGFVGLNTLFVALCNSEDFRKLDFSALKVTLSGGMALQLATAERWKQVTGCPICEGY 358

Query: 360 GLSETSPCVTCNPVTVTEYSGTIGLPLPSTEISIRDDEGNEVPLGQPGEICIRGPQVMAG 419
           GL+ETSP  + NP+   +  G+IG+P+PST+  + +D+G ++  G+ GE+CI+GPQVM G
Sbjct: 359 GLTETSPVASVNPIEHIQL-GSIGIPVPSTQFKVINDDGQDLAQGEIGELCIKGPQVMKG 417

Query: 420 YWNRPDETAKVMTADGFFKSGDVGLMNDGGFVKIVDRKKDMILVSGFNVYPNEIEDVVAK 479
           YW RP+ T +V+ A G+FK+GD+G++ + G+++IVDRKKDMILVSGFNVYPNE+EDV+A 
Sbjct: 418 YWQRPEATDEVIDAQGWFKTGDIGVIQEDGYIRIVDRKKDMILVSGFNVYPNELEDVLAS 477

Query: 480 LPGVFEVAAVGVPDQHSGEAVKLF-VVKKDQALTDADIFAYCKQQLTGYKRPKIVEFRTE 538
           LPGV + AA+GVPD+ SGEA+KLF VVK  ++LT   +  +    LTGYKRPK VEFR  
Sbjct: 478 LPGVLQSAAIGVPDEKSGEAIKLFVVVKPGESLTKEQVMQHMHDNLTGYKRPKAVEFRDS 537

Query: 539 LPKSNVGKILRRELRD 554
           LP +NVGKILRRELRD
Sbjct: 538 LPTTNVGKILRRELRD 553