Pairwise Alignments

Query, 557 a.a., long-chain fatty acid--CoA ligase from Burkholderia phytofirmans PsJN

Subject, 565 a.a., long-chain-fatty-acid--CoA ligase FadD from Rahnella sp. WP5

 Score =  614 bits (1584), Expect = e-180
 Identities = 312/556 (56%), Positives = 407/556 (73%), Gaps = 7/556 (1%)

Query: 1   MDKIWLKSYPPGVPAEIDPSRYSSVGELLEEAFREHRAKPAFVCMGKEISYGELDALSRK 60
           M+K+WLK YP  VP  IDP RYSS+ E+ E A   +    AF+ MG+ ++Y +L+  SR 
Sbjct: 1   MEKVWLKRYPADVPENIDPDRYSSLVEMFENATLRYADNAAFINMGEVMTYRKLEERSRA 60

Query: 61  LAAWFQSK-GLARGARIAIMMPNVLQYPVAIAAILRAGYVVVNVNPLYTPRELEHQLKDS 119
            AA+ Q++ GL +G R+A+MMPN+LQYP+A+  +LRAG VVVNVNPLYTPRELEHQL DS
Sbjct: 61  FAAYLQNELGLRKGDRVALMMPNLLQYPIALFGVLRAGMVVVNVNPLYTPRELEHQLNDS 120

Query: 120 GAEAIILLENFAVTLQAIVRNTSIKHVVVAAMGD-LMGIKGTLVNFVVRKVKKMVPAWSL 178
           GA AI+++ NFA TL+ +V  T +KHV++  MGD L   KGTLVNFVV+ +K++VP + L
Sbjct: 121 GASAIVIVSNFAHTLEKVVYKTQVKHVILTRMGDQLSAAKGTLVNFVVKYIKRLVPKYHL 180

Query: 179 PGHVKFNTAIAEGARQNFKPVQQGPEDVAFLQYTGGTTGVAKGATLLHRNLIANVLQSEI 238
           P  + F TA+  G R  +        D+AFLQYTGGTTGVAKGA L HRN+ AN+ Q++ 
Sbjct: 181 PNAISFRTALQRGRRLQYIKPDIINNDLAFLQYTGGTTGVAKGAMLTHRNMQANLEQAKA 240

Query: 239 WLDPVRANRKDIDQFVTVVALPLYHVFALTVCGLLTIRTGGLGVLIPNPRDIPGMIKALE 298
              P+     ++     V ALPLYH+FALTV  LL +  GG  +LI NPRD+PGM+K L 
Sbjct: 241 AYAPLLQPGHEL----VVTALPLYHIFALTVNCLLFLELGGKSLLITNPRDVPGMVKELG 296

Query: 299 GYPITTIPAVNTLYNALLNSPDFHKLDFSKLIAANGGGMAVQEAVAKRWYEQTHTPIIEG 358
            YP T I  VNTL+NALLN+ DF +LDFS L  + GGGM+VQ++VA++W + T   ++EG
Sbjct: 297 KYPFTAISGVNTLFNALLNNEDFRELDFSSLRLSVGGGMSVQKSVAEKWEKLTGKHLLEG 356

Query: 359 YGLSETSPCVTCNPVTVTEYSGTIGLPLPSTEISIRDDEGNEVPLGQPGEICIRGPQVMA 418
           YGL+E SP V+ NP  +  YSG+IGLP+PSTE+ + DD G +V  GQPGE+ ++GPQVM 
Sbjct: 357 YGLTECSPLVSGNPYDLKHYSGSIGLPVPSTEVRLVDDNGKDVGPGQPGELWVKGPQVML 416

Query: 419 GYWNRPDETAKVMTADGFFKSGDVGLMNDGGFVKIVDRKKDMILVSGFNVYPNEIEDVVA 478
           GYW RP  T +V+  DG+  +GD+  +++ GF++IVDRKKDMILVSGFNVYPNEIE+VV+
Sbjct: 417 GYWQRPSATDEVL-KDGWLSTGDIVTVDEQGFLRIVDRKKDMILVSGFNVYPNEIEEVVS 475

Query: 479 KLPGVFEVAAVGVPDQHSGEAVKLFVVKKDQALTDADIFAYCKQQLTGYKRPKIVEFRTE 538
           +   V EVAA+GVPD+ SGE VK+ VVKKD +LT  ++ A+C++ LTGYK PKIVEFR E
Sbjct: 476 QHDKVLEVAAIGVPDESSGEIVKICVVKKDPSLTSEELLAHCRRLLTGYKVPKIVEFRDE 535

Query: 539 LPKSNVGKILRRELRD 554
           LPKSNVGKILRRELRD
Sbjct: 536 LPKSNVGKILRRELRD 551