Pairwise Alignments

Query, 389 a.a., porin from Burkholderia phytofirmans PsJN

Subject, 380 a.a., Outer membrane protein (porin) from Paraburkholderia bryophila 376MFSha3.1

 Score =  321 bits (822), Expect = 2e-92
 Identities = 183/397 (46%), Positives = 231/397 (58%), Gaps = 25/397 (6%)

Query: 1   MKKSLLALAALGAFAGVAHAQSSVTLYGIIDEGFNINTNSGGKHLYNLSSGVLQGSRFGL 60
           MKKSL+ +A   +FA VAHAQSSVTLYG++D G    +N      +   SG +  SRFGL
Sbjct: 1   MKKSLIVVAVAASFASVAHAQSSVTLYGLLDAGVTYTSNVAHNSKWAAGSGGIDQSRFGL 60

Query: 61  RGTEDLGGGLKAIFVLENGFDVNNGKLGQGGLMFGRQAYVGLSS-QFGTVTLGRQYDSVV 119
           RG+EDLGGGLKAIF LE+GF+VNNG+      MF RQA+VGLSS QFG+VTLGRQYD+  
Sbjct: 61  RGSEDLGGGLKAIFTLESGFNVNNGRFANNNGMFNRQAFVGLSSAQFGSVTLGRQYDAAQ 120

Query: 120 DYVGPLEAGDQWGGYIAAHPGDIDNF--NNAYRTNNTVKYTSANYGGLTFGGTYSFGGIA 177
           D++ PL A   WGG   AHP + DN   N  +  NN+VKY+SANY G TFGGTY F   A
Sbjct: 121 DFLAPLTATGSWGGTYFAHPFNNDNLNTNGGFAVNNSVKYSSANYAGFTFGGTYGFSNQA 180

Query: 178 GNVTSNQIWSLGAGYNNGPLVLGVGYLNARTPAAAGGLFNTGSTAAAPAAAVTSPIYAGF 237
           G   +N+ +SLGA Y    L LG  Y     P A      T +   A     T   + G 
Sbjct: 181 GAFANNREYSLGAAYQWQGLRLGAAYAQQNNPGA------TNAAGTASNGGATDGGFLGA 234

Query: 238 TSANTYQVIGAGGAYTFGAATIGATYSNIRFGNLGASYASPFKGQSATFNNAELNFKYQL 297
           T     +  GA G+Y FG AT+G  ++  R  N+          QS   NN E+N KY L
Sbjct: 235 TGNFRQREFGAAGSYAFGPATVGLAWTQSRIDNVAGVQ------QSLRANNYEVNGKYNL 288

Query: 298 TPALLVGAAYDYTRG-----AEINGNSRAQYHQGAVGVDYFLSKRTDVYVTGVYQHALGD 352
           TPAL +G AY +T G     A   G++  +YHQ  +  DY LS+RTDVY   VYQHA+GD
Sbjct: 289 TPALGLGVAYTFTDGKGYGTAANGGSTSVRYHQIGLQADYALSRRTDVYAQAVYQHAMGD 348

Query: 353 TVTAGGAVVDATAGINGLSGSSNQNQFTARIGIRHKF 389
                G V    +G    + SS++NQ  A +G+RH+F
Sbjct: 349 -----GGVASIYSGDITQAPSSSKNQTAATVGLRHRF 380