Pairwise Alignments

Query, 512 a.a., D-galactose ABC transporter, ATPase component (from data) from Burkholderia phytofirmans PsJN

Subject, 520 a.a., ABC transporter for L-fucose, ATPase component (from data) from Herbaspirillum seropedicae SmR1

 Score =  404 bits (1037), Expect = e-117
 Identities = 218/498 (43%), Positives = 324/498 (65%), Gaps = 16/498 (3%)

Query: 9   NIGKVFPGVRALDGVSFDVNVGQVHGLMGENGAGKSTLLKILGGEYQPDSGRVMIDGNEV 68
           N+ K FPGV ALD   F++  G+VH LMGENGAGKSTL+KIL G YQ DSG +++DG  V
Sbjct: 27  NVCKRFPGVLALDNCQFELAAGEVHALMGENGAGKSTLMKILSGVYQRDSGDILLDGKPV 86

Query: 69  RFTSAASSIAAGIAVIHQELQYVPDLTVAENLLLGQLP-NSLGW------VNKREAKRFV 121
             T    + A GI +IHQEL  +  L+ A+N+ +G+ P  ++G       +N++ A  F 
Sbjct: 87  EITEPRQAQALGIGIIHQELNLMNHLSAAQNIFIGREPRKAMGLFIDEDELNRQAAAIFA 146

Query: 122 RERLEAMGVALDPNAKLRKLSIAQRQMVEICKALLRNARVIALDEPTSSLSHRETEVLFK 181
           R RL+     +DP+  + +L++A++QMVEI KAL  ++RV+ +DEPT++L++ E   LF+
Sbjct: 147 RMRLD-----MDPSTPVGELTVARQQMVEIAKALSFDSRVLIMDEPTAALNNAEIAELFR 201

Query: 182 LVRDLRADNRAMIYISHRMDEIYELCDACTIFRDGRKIASHPTLEGVTRDTIVSEMVGRE 241
           ++RDL+A    ++YISH+MDE+ ++ D  ++ RDG+ IA+ P ++  + DTI+S MVGR 
Sbjct: 202 IIRDLQAQGVGIVYISHKMDELRQIADRVSVMRDGKYIATVP-MQETSMDTIISMMVGRA 260

Query: 242 ISDIYNYSA-RPLGEVRFAAKGIEGHALAQPASFEVRRGEIVGFFGLVGAGRSELMHLVY 300
           +             +V    +G+      +  SF +R+GEI+GF GL+GAGR+E+   ++
Sbjct: 261 LDGEQRIPPDTSRNDVVLEVRGLNRGRAIRDVSFTLRKGEILGFAGLMGAGRTEVARAIF 320

Query: 301 GADHKKGGELLLDGKPIKVRSAGEAIRHGIVLCPEDRKEEGIVAMATVSENINISCRRHY 360
           GAD  + GE+++ G    ++S  +A+ HGI    EDRK  G+     V  NI +S    +
Sbjct: 321 GADPLEAGEIIIHGGKAVIKSPADAVAHGIGYLSEDRKHFGLAVGMDVQANIALSSMGRF 380

Query: 361 LRVGMFLDRKKEAETADRFIKLLKIKTPSRRQKIRFLSGGNQQKAILSRWLAEPDLKVVI 420
            RVG F+D++   E A  +++ L IKTPS  Q+ R LSGGNQQK ++++WL   D  ++ 
Sbjct: 381 TRVG-FMDQRAIREAAQMYVRQLAIKTPSVEQQARLLSGGNQQKIVIAKWLLR-DCDILF 438

Query: 421 LDEPTRGIDVGAKHEIYNVIYQLAERGCAIVMISSELPEVLGVSDRIVVMRQGRISGELT 480
            DEPTRGIDVGAK EIY ++  LAE+G AIVMISSELPEVL +S R++VM +GRI+GEL 
Sbjct: 439 FDEPTRGIDVGAKSEIYKLLDALAEQGKAIVMISSELPEVLRMSHRVLVMCEGRITGELA 498

Query: 481 RKDATEQSVLSLALPQSS 498
           R DAT++ ++ LA  + S
Sbjct: 499 RADATQEKIMQLATQRES 516



 Score = 93.6 bits (231), Expect = 2e-23
 Identities = 70/258 (27%), Positives = 130/258 (50%), Gaps = 11/258 (4%)

Query: 249 SARPLGEVRFAAKGIEGHALAQPASFEVRRGEIVGFFGLVGAGRSELMHLVYGADHKKGG 308
           S+ P+  +R   K   G        FE+  GE+    G  GAG+S LM ++ G   +  G
Sbjct: 18  SSVPVIALRNVCKRFPGVLALDNCQFELAAGEVHALMGENGAGKSTLMKILSGVYQRDSG 77

Query: 309 ELLLDGKPIKVRSAGEAIRHGIVLCPEDRKEEGIVAMATVSENINISCRRHYLRVGMFLD 368
           ++LLDGKP+++    +A   GI +     +E  ++   + ++NI I  R     +G+F+D
Sbjct: 78  DILLDGKPVEITEPRQAQALGIGII---HQELNLMNHLSAAQNIFIG-REPRKAMGLFID 133

Query: 369 RKK-EAETADRFIKLLKIKTPSRRQKIRFLSGGNQQKAILSRWLAEPDLKVVILDEPTRG 427
             +   + A  F ++     PS    +  L+   QQ   +++ L+  D +V+I+DEPT  
Sbjct: 134 EDELNRQAAAIFARMRLDMDPS--TPVGELTVARQQMVEIAKALSF-DSRVLIMDEPTAA 190

Query: 428 IDVGAKHEIYNVIYQLAERGCAIVMISSELPEVLGVSDRIVVMRQGRISGELTRKDATEQ 487
           ++     E++ +I  L  +G  IV IS ++ E+  ++DR+ VMR G+    +  ++ +  
Sbjct: 191 LNNAEIAELFRIIRDLQAQGVGIVYISHKMDELRQIADRVSVMRDGKYIATVPMQETSMD 250

Query: 488 SVLSLALPQSSTALPGTQ 505
           +++S+ +     AL G Q
Sbjct: 251 TIISMMV---GRALDGEQ 265