Pairwise Alignments

Query, 246 a.a., 16S rRNA methyltransferase from Burkholderia phytofirmans PsJN

Subject, 244 a.a., 16S rRNA (uracil(1498)-N(3))-methyltransferase from Rhodanobacter denitrificans FW104-10B01

 Score =  197 bits (501), Expect = 2e-55
 Identities = 109/240 (45%), Positives = 148/240 (61%), Gaps = 6/240 (2%)

Query: 3   RFFVGTPLQPEDVLPLPDDVVRHV-LVLRLQPGDSIVLFNGEGGEYSAELVEVERRSAMV 61
           R  V  PL       LP     HV  VLR+ PGD + LFNG+G +Y+A ++ V +R   V
Sbjct: 5   RIHVDQPLVVYAEPNLPPQAAEHVGRVLRMNPGDPLTLFNGDGHDYAAVILAVGKREVAV 64

Query: 62  KIREFRDIEVEAPYRLTLAQGIAGGDKMDWLIEKAVELGASSFVPLTTTRSVVRLSGDRA 121
           ++   + +  E+P  LTLAQG+A G+KMD +++KA ELG +  VPL T RS VRL   RA
Sbjct: 65  RVESKQALRNESPLALTLAQGVARGEKMDLIVQKATELGVARIVPLLTERSEVRLDAARA 124

Query: 122 QRRHAHWQGIVRASCEQCGRNRLPEVMPVREIATWLGSMPRTPEEGDLRILLSPRASISF 181
           ++R AHW+ +V ++CEQ GR RLPEV P   +A WLGS+    ++G LR+ L P A  S 
Sbjct: 125 EKRLAHWRAVVASACEQSGRARLPEVAPALPLAAWLGSL---ADDGTLRLALLPEADRSP 181

Query: 182 SALPSEPPKGRVTVLVGPEGGFSATEEAAAAAHGFTAVGLGPRVMRTETAGIAVLSALAA 241
             L   P  G   ++VGPEGG    +  A +A GF  + LGPR++RTETAG+A L+AL A
Sbjct: 182 RQLQFGPAGG--LLVVGPEGGLGERDVDALSAAGFEGLRLGPRILRTETAGLAALAALQA 239