Pairwise Alignments

Query, 246 a.a., 16S rRNA methyltransferase from Burkholderia phytofirmans PsJN

Subject, 251 a.a., 16S rRNA (uracil(1498)-N(3))-methyltransferase from Rhodopseudomonas palustris CGA009

 Score = 84.0 bits (206), Expect = 3e-21
 Identities = 77/253 (30%), Positives = 112/253 (44%), Gaps = 21/253 (8%)

Query: 2   PRFFVGTPLQPEDVLPLPDDVVRHV-LVLRLQPGDSIVLFNGEGGEYSAELVEVERRSAM 60
           PR FV   L P   +PL  D   ++  VLRL  G +++ FNG  GE+ A +   +R  A+
Sbjct: 9   PRLFVDAALAPGAQVPLERDQSNYLGNVLRLGAGAAVLAFNGRDGEWRATIAGRKRPEAL 68

Query: 61  VKIREFRDIEVEAPYRLTLAQGIAGGDKMDWLIEKAVELGASSFVPLTTTRSVV-RLSGD 119
               + R  +         A       ++D++ +KAVE+GA    P+ T  + V RL+ D
Sbjct: 69  EVAEQTRPQDRLPDVAYVFAP--LKHARLDYMAQKAVEMGAGRLQPVLTQHTQVHRLNTD 126

Query: 120 RAQRRHAHWQGIVRASCEQCGRNRLPEVMPVREIATWLGSMPRTPEEGDLRILLSPRASI 179
           R +         V  + EQCG   L EV     +  +L           L +     A I
Sbjct: 127 RMRAN-------VIEAAEQCGILSLAEVGEPIGLDRFLAGRANGER---LLVFCDEDAEI 176

Query: 180 S-----FSALPSEPPKGRVTVLVGPEGGFSATEEAAAAAH-GFTAVGLGPRVMRTETAGI 233
           +       A      +G V +LVGPEGGFS  E A          + LGPR+MR +TA +
Sbjct: 177 ADPVAALQAARDAAARG-VDLLVGPEGGFSTEERALLLKQPAILRLALGPRIMRADTAAV 235

Query: 234 AVLSALAAGWGGW 246
           A L+ + A  G W
Sbjct: 236 AALTLVQAVLGDW 248