Pairwise Alignments

Query, 440 a.a., ABC transporter for D-Sorbitol, periplasmic substrate-binding component (from data) from Burkholderia phytofirmans PsJN

Subject, 435 a.a., extracellular solute-binding protein family 1 (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  466 bits (1200), Expect = e-136
 Identities = 234/435 (53%), Positives = 291/435 (66%), Gaps = 12/435 (2%)

Query: 7   STLKAVSAGAVACFALSASAATVTIATLNNPDMIELKKLSPEF-EKANPDIKLNWVILEE 65
           + L  VS+GA+A       +  + IAT+NN DMI ++ L+ +F +K    ++  WV LEE
Sbjct: 11  TALTLVSSGAMA-------SENLVIATVNNGDMIRMQGLTQDFTDKTGHTVE--WVTLEE 61

Query: 66  NVLRQRATTDITTGSGQFDVMTIGAYETPQWGKRGWLTPLTNLPADYDLNDVVKTARDGL 125
           NVLRQR TTDI    G FD+MTIG YETP WG  GWL PL +L ADY+ +D++   R GL
Sbjct: 62  NVLRQRVTTDIAAKGGSFDIMTIGMYETPIWGANGWLVPLDDLSADYNADDILPAMRAGL 121

Query: 126 SSGGQLYALPFYVESSMTYYRKDLFEKAGLKMPDQPTYDQIKQFADKLTDKANGIYGICL 185
           S  G LYA PFY ESSM  YRKDL EKAGL+MPD PT+  I++ A  +TD+ N I GICL
Sbjct: 122 SHDGTLYAAPFYGESSMIMYRKDLMEKAGLEMPDAPTWQFIREAAAAMTDRENDINGICL 181

Query: 186 RGKAGWGENMAYGTTVVNTFGGRWFDEKWNAQLTSPEWKKAMTFYVDLLKKDGPPGASSN 245
           RGKAGWGE  A+ T   N+FG RWFDE WNAQ   PEWK+A+ F+V ++ + GP G ++N
Sbjct: 182 RGKAGWGEGGAFITVTANSFGARWFDEDWNAQFDQPEWKEALEFFVGMMNESGPNGYATN 241

Query: 246 GFNENLTLMSSGKCAMWIDATVAAGMLYNKQQSQIADKVGFAAAPVAV-TPKGSHWLWAW 304
           GFNENL L   GKC MWIDATVAA  + N   S +AD+VGFA AP +    K ++WLWAW
Sbjct: 242 GFNENLNLFQQGKCGMWIDATVAASFVTNPNDSTVADQVGFALAPNSEGIEKRANWLWAW 301

Query: 305 ALAIPKSSKQADAAKKFITWATSKQYIELVAKDEGWASVPPGTRKSTYARAEYKQAAPFG 364
           ALAIP  +++ADAAK+FI WATS  YIELVA +EGWA+VPPG R S Y    YK   PF 
Sbjct: 302 ALAIPAGTQKADAAKEFIEWATSTDYIELVAANEGWANVPPGARTSLYENENYKD-IPFA 360

Query: 365 DFVLKAIETADPEHPTLKPVPYTGVQFVGIPEFQSFGTVVGQSISGAIAGQMTIDQALAA 424
              L +I  ADP  PT+ PVPY G+QFV IPEF    T V Q  S   AGQ T+++AL  
Sbjct: 361 KMTLDSILAADPTDPTVDPVPYVGIQFVAIPEFAGIATEVSQEFSAVYAGQQTVEEALEK 420

Query: 425 GNATADRAVKQAGYQ 439
             A  + A++ AGY+
Sbjct: 421 AQALTNDAMEAAGYR 435