Pairwise Alignments

Query, 291 a.a., ABC transporter for D-Sorbitol, permease component 1 (from data) from Burkholderia phytofirmans PsJN

Subject, 319 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  132 bits (332), Expect = 1e-35
 Identities = 84/317 (26%), Positives = 154/317 (48%), Gaps = 44/317 (13%)

Query: 17  VPAKSPFAAIRRGIPGVIAWLVALLLFFPIFWMTITAFKTEQQA--YASSLFFIPTLDSF 74
           V  +S  A  R  I  V+  ++ LL   PI+W+T TAFK    A     ++ F P +  F
Sbjct: 4   VQTRSERALNRVAIAAVL--VITLLFLAPIYWITSTAFKPRNLATTIPPTVIFEPEISPF 61

Query: 75  REVFAR----------SNYFSFAW------------------------------NSILIS 94
            ++F +           +Y +  W                              NS++++
Sbjct: 62  VKLFTKRSQLRSAPEPEDYAAAPWWERLVFDGGEKVVRSGRGQVQLSGYPNRFMNSLIVA 121

Query: 95  AGVTILCLILAVPAAYAMAFFPTRRTQKVLLWMLSTKMMPSVGVLVPIYLLWKNSGLLDS 154
              T+L + +    AY  + F  +    +L ++LST+M+P V V +P++L+++  GL D+
Sbjct: 122 ITSTVLAVAMGTFTAYGFSRFKVKGEADLLFFILSTRMLPPVVVAIPMFLMYRAVGLNDT 181

Query: 155 VSGLVIVYTLINLPIAVWMSFTYFAEIPRDILEAGRIDGAATWQEIVYLLMPMSLPGLAS 214
             GL+I+YT  NL  +VW+   +  EIP++  EA  +DG    +    +++P +  G+A+
Sbjct: 182 HWGLIILYTAFNLSFSVWLMKGFIDEIPKEYEEAALVDGYTRLEAFFKIVLPEAATGIAA 241

Query: 215 TALLLVILSWNEAFWSINLSSSNAAPLTVFIASYSSPEGLFWAKLSAASLLAVAPILIVG 274
           TA+   I +WNE  +++ +++  A     FI S        W  ++A + L + P+ I  
Sbjct: 242 TAVFCFITAWNEYAFALIMTNRRAQTAPPFIPSQVGSGLPDWTVIAAGTFLFLLPVAIFT 301

Query: 275 WLSQKQLVRGLTFGAVK 291
           +L +  L+RG++FGA++
Sbjct: 302 FLLRNHLLRGMSFGAIR 318