Pairwise Alignments

Query, 291 a.a., ABC transporter for D-Sorbitol, permease component 1 (from data) from Burkholderia phytofirmans PsJN

Subject, 278 a.a., sugar ABC transporter permease from Herbaspirillum seropedicae SmR1

 Score =  139 bits (351), Expect = 5e-38
 Identities = 73/261 (27%), Positives = 141/261 (54%), Gaps = 7/261 (2%)

Query: 37  LVALLLFF-----PIFWMTITAFKTEQQAYASSLFF--IPTLDSFREVFARSNYFSFAWN 89
           L+ +LL+      P++W+  T+ KT ++  +    +   PTL++++ +F   +++S   N
Sbjct: 18  LLVMLLYIAFTLVPLYWLLNTSLKTNEETLSVFTLWPNAPTLNNYKTIFTDPSWYSGYIN 77

Query: 90  SILISAGVTILCLILAVPAAYAMAFFPTRRTQKVLLWMLSTKMMPSVGVLVPIYLLWKNS 149
           SI+  A  T++ L++A+PAAYA + +     + +  W+L+ +M P    L+P + L+   
Sbjct: 78  SIIYVAMNTVMSLLVALPAAYAFSRYRFLGDKHMFFWLLTNRMTPPAVFLLPFFQLYSTI 137

Query: 150 GLLDSVSGLVIVYTLINLPIAVWMSFTYFAEIPRDILEAGRIDGAATWQEIVYLLMPMSL 209
           GL D+   + + + L N+P+AVW+   + + +PR+I E   IDG +  +  + + +P+  
Sbjct: 138 GLSDTHIAVALAHMLFNVPLAVWILEGFMSGVPREIDETAYIDGFSFPRFFLRIFLPLIK 197

Query: 210 PGLASTALLLVILSWNEAFWSINLSSSNAAPLTVFIASYSSPEGLFWAKLSAASLLAVAP 269
            G+  TA    + SW E   +  L+S NA P++  +   +S  G+ W  L+AA +L + P
Sbjct: 198 SGVGVTAFFCFMFSWVELLLARTLTSVNAKPISAIMTRTASAAGMDWGILAAAGVLTIVP 257

Query: 270 ILIVGWLSQKQLVRGLTFGAV 290
             +V W  +  + +G   G V
Sbjct: 258 GALVIWFVRNHIAKGFAMGRV 278