Pairwise Alignments

Query, 291 a.a., ABC transporter for D-Sorbitol, permease component 1 (from data) from Burkholderia phytofirmans PsJN

Subject, 276 a.a., binding-protein-dependent transport systems inner membrane component (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  331 bits (849), Expect = 1e-95
 Identities = 164/268 (61%), Positives = 211/268 (78%), Gaps = 3/268 (1%)

Query: 27  RRGIPGVIAWLVALLLFFPIFWMTITAFKTEQQAYASSLFFIP---TLDSFREVFARSNY 83
           R+ I   +AW + LL+FFPI W  +T+FKTE  A A    F+    TL+++  V  RSNY
Sbjct: 9   RKLINTTLAWGIGLLIFFPILWTILTSFKTEATAIADPPVFLAFDWTLENYTAVLERSNY 68

Query: 84  FSFAWNSILISAGVTILCLILAVPAAYAMAFFPTRRTQKVLLWMLSTKMMPSVGVLVPIY 143
             F WNSI+I+ G TIL +++AVPAA++MAF P+RRT+ +LLWMLSTKM+P+VGVL PIY
Sbjct: 69  AKFLWNSIIIAGGSTILGIMIAVPAAWSMAFVPSRRTKDILLWMLSTKMLPAVGVLYPIY 128

Query: 144 LLWKNSGLLDSVSGLVIVYTLINLPIAVWMSFTYFAEIPRDILEAGRIDGAATWQEIVYL 203
           L+    G+LDS   LV++  L+NLPI VWM +TYF EIP +ILEA R+DGA+  +EI+Y+
Sbjct: 129 LICIELGILDSRVALVVILMLMNLPIIVWMLYTYFKEIPGEILEAARMDGASLKEEILYV 188

Query: 204 LMPMSLPGLASTALLLVILSWNEAFWSINLSSSNAAPLTVFIASYSSPEGLFWAKLSAAS 263
           L PM++PG+AST LL  IL+WNEAFW++NL+++NAAPLT FIASYSSPEGLF+AKLSAAS
Sbjct: 189 LTPMAIPGIASTLLLNFILAWNEAFWTLNLTAANAAPLTAFIASYSSPEGLFFAKLSAAS 248

Query: 264 LLAVAPILIVGWLSQKQLVRGLTFGAVK 291
            +A+APILI+GW SQKQLV GLTFGAVK
Sbjct: 249 TMAIAPILILGWFSQKQLVSGLTFGAVK 276