Pairwise Alignments

Query, 278 a.a., transposase from Burkholderia phytofirmans PsJN

Subject, 269 a.a., ISSod1, transposase OrfB (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  221 bits (564), Expect = 1e-62
 Identities = 115/262 (43%), Positives = 164/262 (62%), Gaps = 4/262 (1%)

Query: 18  LKVPRSSYYAFAARPPKPGA--SPPLLKAVRQIHSESRSSYGSRRMAQALQQQGYAIGRY 75
           + V +S YY +  RP    +  +  L + VRQ+  +SR S G+R M + L+++GY +GRY
Sbjct: 1   MSVSKSGYYDWHKRPANVISVETLKLYRLVRQLFKQSRGSLGNREMVKKLRKEGYQVGRY 60

Query: 76  RARSLMREAQLAVARRRTHRYRKAEGEA-LIAPNLLERQFEPGAINRVWAGDITYVRTRQ 134
             R +M   +L   +R  ++       +  +A NLL   F P + N+VWAGD+TY++T +
Sbjct: 61  LVRKIMHRLRLKATQRCAYKVTTQRKHSDAVADNLLNMNFNPVSANQVWAGDVTYLKTGE 120

Query: 135 GWSYLAIVMDLHSRRIVGWAFALQADTELVIQALQQARQKRRPAAGLMFHSDQGCQYTSE 194
           GW YLA+VMDL+SRRIVGW    +  T+L+ +AL +A   R+PA GL+FHSD+G QYTS+
Sbjct: 121 GWMYLAVVMDLYSRRIVGWRIDKRMTTDLISKALIKAYNLRQPARGLVFHSDRGSQYTSK 180

Query: 195 RFVGDLKANGIVQSMSRKGNCWDNAVVERFFRSLKSEWIGEQEYGNHELARRDIAGYIAD 254
           +F   L + GI  SM   G CWDNAVVERFF SLK +WI +      E  ++D+  YI  
Sbjct: 181 QFGRLLSSYGIRASMGDVGACWDNAVVERFFGSLKHDWIFKVAQPTREFMKQDVTAYI-K 239

Query: 255 FYNYRRIHSAANNLPPVRYETS 276
           +YN  R+HSA N+L PV +E S
Sbjct: 240 YYNLERLHSANNDLSPVEFENS 261