Pairwise Alignments
Query, 615 a.a., tetratricopeptide repeat protein from Burkholderia phytofirmans PsJN
Subject, 1772 a.a., hypothetical protein from Azospirillum brasilense Sp245
Score = 229 bits (584), Expect = 8e-64
Identities = 193/594 (32%), Positives = 273/594 (45%), Gaps = 29/594 (4%)
Query: 41 LGVLRHQQGQHAEAAELVRRAVNLRP-EDAALQLNLGNALKALGQIDDAIEQFRNALTLA 99
LG L +++G AEA ++ AV+ DA L +LG+AL+ G++ +A+ ++R AL
Sbjct: 5 LGTLLNERGDFAEAVAVLAPAVDADTGRDARLLFHLGSALQGDGRLAEAVARYREALLQD 64
Query: 100 PSFPMAHYNLGNAYAAAGRHEDAADAFEKSLRLQPDDASSHNNFGNALHALGRHTEAIAA 159
P A NLG A G H A + L+P DA + NN G L + R A
Sbjct: 65 PLLAGAWNNLGVALLDLGDHAAAVRVLRTCIALRPTDAVAFNNLGTGLDGVERPEAAAGV 124
Query: 160 FRRTIELRPGHAGALNNMGMSLNALGRAEEAIPCFQTALAAEPRFVAAHFNLANTFDATG 219
FRR++ ++P + ALNN+G S RAE A ++ AL +P + ++ NL N
Sbjct: 125 FRRSLIIQPDYGKALNNLGNSRRVARRAEAAEALYRRALIVQPDYPDSYTNLGNVLKDWD 184
Query: 220 RHAEAVASFKAALALQPNLPPAIFGMGNALAALGRHAEALPYLERAVGLDPQFALAWLSL 279
A+ + A+ L P A +G AL LGR+ EA RA+ +DP A A+ +L
Sbjct: 185 DWQGALRLHRRAVRLAPRSAIARTTLGLALNVLGRNEEAEAAHRRALSIDPGHAEAYANL 244
Query: 280 GTAHQALGAHGPAVRALDQALRLRPDLASAHMNRALAWLAQRDFARGLPEYEWRLQTMAQ 339
G A R L +ALR+ P LA+A +N AL LA + + G Y+ R +
Sbjct: 245 GMLQWQSTRVAEAERTLRRALRIDPTLAAARLNFALVSLASGNLSEGWEAYQDRFRAKGH 304
Query: 340 PVIQTL--PRWHGEPIAERTLLVHAEQGFGDTLQFVRFVPLVAQRAA-----RVVLEVQP 392
P +T+ P W + R LLV EQG GD + F P +A R A +VVLE P
Sbjct: 305 PE-RTIGAPLWRDDAATVRRLLVWREQGVGDEMMFASCYPALADRVAAGRIGQVVLECDP 363
Query: 393 QLLPLLAPAAQAWRVTLIAQGAPR-------PAADLHCPLLSLPLALGTTFDTIPQRTPY 445
+L+ L + + W AP P D H +LP L + P R P+
Sbjct: 364 RLVSLFS-RSFPWATVRGEAAAPHGTETLVSPDGDAHIAAGALPRLLRPDLASFPPR-PW 421
Query: 446 LSVPAAYGRKWRGSLGGQAK-RKIGIAWSGRIQQNETRS--MQLAALDPLFALEGIDWIV 502
L WR L KIG AW ++ E ++ + L A +PLFA+ G+ +
Sbjct: 422 LVPDPERLAVWRERLAILGPGLKIGFAWRSQLMTTERKAAYITLEAFEPLFAVPGVVLVN 481
Query: 503 LQPELSAEERMALDTHPRAASIHRFD--KRIGDFADTAAIIERLDAVVSIDTSIAHVAGA 560
LQ E +A +IHR+ DF AA+ LD V++ S +AGA
Sbjct: 482 LQYG-DCEAEIAAAEARFGVTIHRWSDLNLKDDFEGAAALTASLDLVIAPAVSTGELAGA 540
Query: 561 LRKPLWLMLPFAADWRWFAGETGSPWYPGATLVRQPQPGAWGDVVEA-VANALR 613
L P W + A DW G PWYP L QP+PG D V A +A LR
Sbjct: 541 LGVPAWRI--GARDWTQL-GTGVRPWYPTMRLF-QPRPGETLDAVMARIAQTLR 590
Score = 204 bits (520), Expect = 2e-56
Identities = 186/617 (30%), Positives = 259/617 (41%), Gaps = 62/617 (10%)
Query: 3 PVFDRAFAAHRDGRLDDAERGYRATLDGNPAHVDALHLLGVLRHQQGQHAEAAELVRRAV 62
P+ A A +R G L DAE RA LD P H ALHLLG+LR +QG EAA ++ AV
Sbjct: 612 PLVAEAVAGYRAGALKDAEDQCRAALDSVPDHPVALHLLGILRLRQGDAGEAAVVLALAV 671
Query: 63 NLRPEDAALQLNLGNALKALGQIDDAIEQFRNALTLAPSFPMAHYNLGNAYAAAGRHEDA 122
P++AA L +A KA G+ D A+ RNA+ L P N G ++A
Sbjct: 672 KADPDNAAAHAALADACKAAGRHDSALAAQRNAVLLRPDAAEHWLNRTALLRERGAGDEA 731
Query: 123 ADAFEKSLRLQPDDASSHNNFGNALHALGRHTEAIAAFRRTIELRPGHAGALNNMGMSLN 182
++LR++P +H + G+ L A + RR + L P AL N+G
Sbjct: 732 EACARRALRIRPSLGVAHTHLGHLLAEREDRAGAERSHRRALALTPSEVDALVNLGALRL 791
Query: 183 ALGRAEEAIPCFQTALAAEPRFVAAHFNLANTFDATGRHAEAVASFKAALALQPNLPPAI 242
+ EA + A P A + + D GR +A A A+ P + A
Sbjct: 792 RADQPAEAERLLRRATVTAPHAAIAWSHRGSALDRLGRVEKAFACHSRAVGRAPEMAEAQ 851
Query: 243 FGMGNALAALGRHAEALPYLERAVGLDPQFALAWLSLGTAHQALGAHGPAVRALDQALRL 302
+ A R AEA+ A+ ++P A
Sbjct: 852 ANLAMHWARRQRPAEAIAAYREAIRINPALPTA--------------------------- 884
Query: 303 RPDLASAHMNRALAWLAQRDFARGLPEYEWRLQTMAQPVIQTLPR------WHGEPIAER 356
H N +L L Q + G E++WR T P + R W GE IA
Sbjct: 885 -------HYNLSLLLLEQGELRSGWAEHDWRFDT---PQFRDQKRRFAVRPWRGENIASA 934
Query: 357 TLLVHAEQGFGDTLQFVRFVPLVAQRAARVVLEVQPQLLPLLA---PAAQAWRVTLIAQG 413
LLV EQG GD + F P + +RA +V+E +L+ L A P A T+
Sbjct: 935 RLLVWREQGVGDEILFASCYPDLLRRAGHLVVECDRRLVSLFARSLPGATVRPPTV---- 990
Query: 414 APRPAADLHCPLLSLPLALGTTFDTIPQRTPYLSVPAAYGRKWRGSLGGQAK-RKIGIAW 472
PR D+ SLP L + + P + P+L +WR L K+GIAW
Sbjct: 991 EPRD-VDVQVAAASLPRLLRSDWKRFPAQ-PWLVPEPGRLDRWRNRLAALGPGLKVGIAW 1048
Query: 473 SGRIQQNETRS--MQLAALDPLFALEGIDWIVLQPELSAEERMALDTHPRAASIHRFD-- 528
+I E R+ + L AL PLFA+ G+ ++ LQ A E A + +IHR+D
Sbjct: 1049 RSQIMDGERRAAYVTLDALAPLFAVPGVVFVNLQYGDCAAEIAAAEAR-FGVTIHRWDDL 1107
Query: 529 KRIGDFADTAAIIERLDAVVSIDTSIAHVAGALRKPLWLMLPFAADWRWFAGETGSPWYP 588
DF AA+ LD V++ S +AGAL P+W DW G PW+P
Sbjct: 1108 NLKDDFEGAAALTANLDLVLTPAVSSGELAGALGVPVWRF--GHRDWTQL-GTGVRPWFP 1164
Query: 589 GATLVRQPQPGAWGDVV 605
L QP+PG D V
Sbjct: 1165 SMRLF-QPRPGEGLDAV 1180
Score = 190 bits (482), Expect = 5e-52
Identities = 172/546 (31%), Positives = 238/546 (43%), Gaps = 22/546 (4%)
Query: 68 DAALQLNLGNALKALGQIDDAIEQFRNALTLAPSFPMAHYNLGNAYAAAGRHEDAADAFE 127
D L L A G++ +A + LT P+A + G +G A
Sbjct: 1207 DPDLLLEAAAAHHRDGRLAEAAPLYERVLTARADHPVALHLSGLLAHQSGDSAAGAGRIA 1266
Query: 128 KSLRLQPDDASSHNNFGNALHALGRHTEAIAAFRRTIELRPGHAGALNNMGMSLNALGRA 187
++L P ++ ++ G L ALGR EA+ FR + L+PG A AL N+G +L A+
Sbjct: 1267 RALDALPAYGAAQSSLGTVLMALGRAPEAVRRFRLALALQPGAAAALTNLGNALEAVHDL 1326
Query: 188 EEAIPCFQTALAAEPRFVAAHFNLANTFDATGRHAEAVASFKAALALQPNLPPAIFGMGN 247
A + A A+P AH N G A + AL L P +G
Sbjct: 1327 RAAAQAHRRATLADPTLAEAHDNWGAVLTRLGALEAAEERHRHALRLAPEREDGWLNLGV 1386
Query: 248 ALAALGRHAEALPYLERAVGLDPQFALAWLSLGTAHQALGAHGPAVRALDQALRLRPDLA 307
AL GR EA L RA+ L P A +LG + G A R +ALR+ P
Sbjct: 1387 ALRRAGRLDEARRTLVRALALAPAQGDALANLGRLLRDRGETAAAERWCRRALRVEPGHP 1446
Query: 308 SAHMNRALAWLAQRDFARGLPEYEWR-----LQTMAQPVIQTLPRWHGEPIAERTLLVHA 362
+A N L LA+ G Y+ R L A+ V +P W GE A LLV A
Sbjct: 1447 AAAFNLGLLDLARGRLEAGWAGYDARFRARELSGAARAV--AVPAWEGEDPAGLRLLVWA 1504
Query: 363 EQGFGDTLQFVRFVPLVAQRAARVVLEVQPQLLPLLA---PAAQAWRVTLIAQGAPRPAA 419
EQG GD + F + + RAA VV+E +L+PL A P A+ WR AP
Sbjct: 1505 EQGIGDEILFAGCLDDLIARAAAVVVECDRRLVPLFARSFPRAE-WRPAPADPEAPCAGI 1563
Query: 420 DLHCPLLSLPLALGTTFDTIPQRTPYLSVPAAYGRKWRGSLGGQAK-RKIGIAWSGRIQQ 478
D H + SLP L FD P R +L+ +WR + K+GIAW +
Sbjct: 1564 DRHVAMGSLPRWLRPRFDRFPSRPSFLTADPERAAQWRERVDALGSGLKVGIAWRSGLMT 1623
Query: 479 NETRS--MQLAALDPLFALEGIDWIVLQPELSAEERMALDTHPRAASIHRF-DKRIGDFA 535
E R L A P+FA+ G ++ LQ A E +A +IHR+ D + D
Sbjct: 1624 AERRGAYAPLDAWGPVFAVPGAIFVTLQYGDCAAE-IAEAERRFGVTIHRWGDLDLKDDL 1682
Query: 536 D-TAAIIERLDAVVSIDTSIAHVAGALRKPLWLMLPFAADWRWFAGETGS-PWYPGATLV 593
D AA++ LD V++ +S+ +AG L P+W F W A TG+ PW+P L+
Sbjct: 1683 DGVAALMTALDLVITPASSVGELAGGLGVPVW---RFGLQGDWTALGTGARPWFPTMALI 1739
Query: 594 RQPQPG 599
P PG
Sbjct: 1740 TAP-PG 1744
Score = 132 bits (333), Expect = 1e-34
Identities = 123/376 (32%), Positives = 153/376 (40%), Gaps = 42/376 (11%)
Query: 4 VFDRAFAAHRDGRLDDAERGYRATLDGNPAHVDALHLLGVLRHQQGQHAEAAELVRRAVN 63
+ + A A HRDGRL +A Y L H ALHL G+L HQ G A A + RA++
Sbjct: 1211 LLEAAAAHHRDGRLAEAAPLYERVLTARADHPVALHLSGLLAHQSGDSAAGAGRIARALD 1270
Query: 64 LRPEDAALQLNLGNALKALGQIDDAIEQFRNALTLAPSFPMAHYNLGNAYAAAGRHEDAA 123
P A Q +LG L ALG+ +A+ +FR AL L P A NLGNA A AA
Sbjct: 1271 ALPAYGAAQSSLGTVLMALGRAPEAVRRFRLALALQPGAAAALTNLGNALEAVHDLRAAA 1330
Query: 124 DAFEKSLRLQPDDASSHNNFGNALHALGRHTEAIAAFRRTIELRPGHAGALNNMGMSLNA 183
A ++ P A +H+N+G L LG A R + L P N+G++L
Sbjct: 1331 QAHRRATLADPTLAEAHDNWGAVLTRLGALEAAEERHRHALRLAPEREDGWLNLGVALRR 1390
Query: 184 LGRAEEAIPCFQTALAAEPRFVAAHFNLANTFDATGRHAEAVASFKAALALQPNLPPAIF 243
GR +EA ALA P A NL G A A + AL ++P P A F
Sbjct: 1391 AGRLDEARRTLVRALALAPAQGDALANLGRLLRDRGETAAAERWCRRALRVEPGHPAAAF 1450
Query: 244 GMGNALAALGR------------HAEALPYLERAV------GLDPQ--FALAWLSLGTAH 283
+G A GR A L RAV G DP L W G
Sbjct: 1451 NLGLLDLARGRLEAGWAGYDARFRARELSGAARAVAVPAWEGEDPAGLRLLVWAEQGIGD 1510
Query: 284 QALGAHGPAVRALDQALRLRPDLASAHMNRALAWLAQRDFARGLPEYEWRLQTMAQP--- 340
+ L A LD L R +R L L FAR P EWR A P
Sbjct: 1511 EILFA-----GCLDD-LIARAAAVVVECDRRLVPL----FARSFPRAEWR-PAPADPEAP 1559
Query: 341 --------VIQTLPRW 348
+ +LPRW
Sbjct: 1560 CAGIDRHVAMGSLPRW 1575
Score = 72.8 bits (177), Expect = 1e-16
Identities = 58/179 (32%), Positives = 83/179 (46%), Gaps = 2/179 (1%)
Query: 24 YRATLDGNPAHVDALHLLGVLRHQQGQHAEAAE-LVRRAVNLRPEDAALQLNLGNALKAL 82
+R +L P + AL+ LG R + + AEAAE L RRA+ ++P+ NLGN LK
Sbjct: 125 FRRSLIIQPDYGKALNNLGNSR-RVARRAEAAEALYRRALIVQPDYPDSYTNLGNVLKDW 183
Query: 83 GQIDDAIEQFRNALTLAPSFPMAHYNLGNAYAAAGRHEDAADAFEKSLRLQPDDASSHNN 142
A+ R A+ LAP +A LG A GR+E+A A ++L + P A ++ N
Sbjct: 184 DDWQGALRLHRRAVRLAPRSAIARTTLGLALNVLGRNEEAEAAHRRALSIDPGHAEAYAN 243
Query: 143 FGNALHALGRHTEAIAAFRRTIELRPGHAGALNNMGMSLNALGRAEEAIPCFQTALAAE 201
G R EA RR + + P A A N + A G E +Q A+
Sbjct: 244 LGMLQWQSTRVAEAERTLRRALRIDPTLAAARLNFALVSLASGNLSEGWEAYQDRFRAK 302
Score = 62.4 bits (150), Expect = 2e-13
Identities = 79/293 (26%), Positives = 113/293 (38%), Gaps = 28/293 (9%)
Query: 16 RLDDAERGYRATLDGNPAHVDALHLLGVLRHQQGQHAEAAELVRRAVNLRPEDAALQLNL 75
R + AE YR L P + D+ LG + A L RRAV L P A + L
Sbjct: 151 RAEAAEALYRRALIVQPDYPDSYTNLGNVLKDWDDWQGALRLHRRAVRLAPRSAIARTTL 210
Query: 76 GNALKALGQIDDAIEQFRNALTLAPSFPMAHYNLGNAYAAAGRHEDAADAFEKSLRLQPD 135
G AL LG+ ++A R AL++ P A+ NLG + R +A ++LR+ P
Sbjct: 211 GLALNVLGRNEEAEAAHRRALSIDPGHAEAYANLGMLQWQSTRVAEAERTLRRALRIDPT 270
Query: 136 DASSHNNFGNALHALGRHTEAIAAFRRTIELRPGHAGALNNMGMSLNALGRAEEAIPCFQ 195
A++ NF A G +E A++ + GH + + + +
Sbjct: 271 LAAARLNFALVSLASGNLSEGWEAYQDRFRAK-GHPERTIGAPLWRDDAATVRRLLVWRE 329
Query: 196 TALAAEPRFVAAHFNLANTFDATGRHAEAVASFKAALALQPNLPPAIFGMGNALAALGRH 255
+ E F + + LA+ A GR + V L P L ++F A +
Sbjct: 330 QGVGDEMMFASCYPALADRV-AAGRIGQVV------LECDPRL-VSLFSRSFPWATVRGE 381
Query: 256 AEALPYLERAVGLDPQFALAWLSLGTAHQALGAHGPAVRALDQALRLRPDLAS 308
A A E V D G AH A GA LRPDLAS
Sbjct: 382 AAAPHGTETLVSPD----------GDAHIAAGA---------LPRLLRPDLAS 415
Score = 48.9 bits (115), Expect = 2e-09
Identities = 27/80 (33%), Positives = 44/80 (55%)
Query: 15 GRLDDAERGYRATLDGNPAHVDALHLLGVLRHQQGQHAEAAELVRRAVNLRPEDAALQLN 74
GR ++AE +R L +P H +A LG+L+ Q + AEA +RRA+ + P AA +LN
Sbjct: 218 GRNEEAEAAHRRALSIDPGHAEAYANLGMLQWQSTRVAEAERTLRRALRIDPTLAAARLN 277
Query: 75 LGNALKALGQIDDAIEQFRN 94
A G + + E +++
Sbjct: 278 FALVSLASGNLSEGWEAYQD 297