Pairwise Alignments

Query, 615 a.a., tetratricopeptide repeat protein from Burkholderia phytofirmans PsJN

Subject, 654 a.a., hypothetical protein from Azospirillum brasilense Sp245

 Score =  222 bits (565), Expect = 4e-62
 Identities = 160/460 (34%), Positives = 216/460 (46%), Gaps = 23/460 (5%)

Query: 156 AIAAFRRTIELRPGHAGALNNMGMSLNALGRAEEAIPCFQTALAAEPRFVAAHFNLANTF 215
           A  +FR    +RP H  A   +G+ L  LG  + A      A    P      F+ A+  
Sbjct: 32  AACSFRTAAAIRPEHPVAWFVLGLVLRGLGLRDGAAVALWAAHRLRPDDADTLFHWASLL 91

Query: 216 DATGRHAEAVASFKAALALQPNLPPAIFGMGNALAALGRHAEALPYLERAVGLDPQFALA 275
               R  EAVA     +AL+P  P A F +GNAL A+     A    + AV L+P  A A
Sbjct: 92  IECRRTGEAVAPLLRLVALRPGYPDAAFSLGNALMAVDEPERAEAAYQLAVLLEPGAAAA 151

Query: 276 WLSLGTAHQALGAHGPAVRALDQALRLRPDLASAHMNRALAWLAQRDFARGLPEYEWRLQ 335
             + G A  + G    A  +  +A+RL P  A  H N  ++ L   +F  G  EYEWR +
Sbjct: 152 NNNRGAAFLSQGRPEDAAVSYRRAVRLEPGSAEHHKNLGVSLLTVGNFLEGTAEYEWRTR 211

Query: 336 TMAQPVIQ------TLPRWHGEPIAERTLLVHAEQGFGDTLQFVRFVPLVAQRAARVVLE 389
              Q V Q        P W G P+A RT+LVH EQG GDT+QF+R++ ++    AR + E
Sbjct: 212 ---QAVWQWNRDRPGTPLWDGGPLAGRTILVHFEQGLGDTVQFIRYMAVLKAMGARTIFE 268

Query: 390 VQPQLLPLLA--PAAQAWRVTLIAQGAPRPAADLHCPLLSLPLALGTTFDTIPQRTPYLS 447
            QP L  LLA  P   A    L+A+G P P AD   PL+SLP    TT  TIP   PYL 
Sbjct: 269 CQPPLKRLLAGVPGIDA----LVARGEPLPEADCLLPLMSLPHRCRTTVATIPGGVPYLR 324

Query: 448 VP---AAYGRKWRGSLGGQAKRKIGIAWSGRIQQNETRSMQLAALDPLFALEGIDWIVLQ 504
                AA+ R+     G   + ++GI W         RS+ L     L  L G+    LQ
Sbjct: 325 AEPERAAFWRRRIAEAGRPGEFRVGIQWRA---AGADRSIPLERFARLSHLSGVRLYSLQ 381

Query: 505 PELSAEERMALDTHPRAASIHRFDKRIGD--FADTAAIIERLDAVVSIDTSIAHVAGALR 562
                 +    D      S+   D +  D  F DTAAIIE +D +V+ D+ + H+AGA+ 
Sbjct: 382 KADGPGQWERPDDRLEIVSLPDRDGKGEDEGFVDTAAIIEGMDLIVACDSVVGHIAGAMG 441

Query: 563 KPLWLMLPFAADWRWFAGETGSPWYPGATLVRQPQPGAWG 602
           +P++L LP+  DWRW      +PWYP    V    P   G
Sbjct: 442 RPVFLALPWLGDWRWMRLPDHTPWYPADPAVPHDAPQRLG 481



 Score = 88.6 bits (218), Expect = 8e-22
 Identities = 60/185 (32%), Positives = 92/185 (49%), Gaps = 4/185 (2%)

Query: 5   FDRAFAA---HRD-GRLDDAERGYRATLDGNPAHVDALHLLGVLRHQQGQHAEAAELVRR 60
           FDR F A   H D G L+ A   +R      P H  A  +LG++    G    AA  +  
Sbjct: 13  FDRCFGAGLCHVDAGSLEAAACSFRTAAAIRPEHPVAWFVLGLVLRGLGLRDGAAVALWA 72

Query: 61  AVNLRPEDAALQLNLGNALKALGQIDDAIEQFRNALTLAPSFPMAHYNLGNAYAAAGRHE 120
           A  LRP+DA    +  + L    +  +A+      + L P +P A ++LGNA  A    E
Sbjct: 73  AHRLRPDDADTLFHWASLLIECRRTGEAVAPLLRLVALRPGYPDAAFSLGNALMAVDEPE 132

Query: 121 DAADAFEKSLRLQPDDASSHNNFGNALHALGRHTEAIAAFRRTIELRPGHAGALNNMGMS 180
            A  A++ ++ L+P  A+++NN G A  + GR  +A  ++RR + L PG A    N+G+S
Sbjct: 133 RAEAAYQLAVLLEPGAAAANNNRGAAFLSQGRPEDAAVSYRRAVRLEPGSAEHHKNLGVS 192

Query: 181 LNALG 185
           L  +G
Sbjct: 193 LLTVG 197



 Score = 69.3 bits (168), Expect = 5e-16
 Identities = 57/204 (27%), Positives = 82/204 (40%)

Query: 26  ATLDGNPAHVDALHLLGVLRHQQGQHAEAAELVRRAVNLRPEDAALQLNLGNALKALGQI 85
           AT DG     D     G+     G    AA   R A  +RPE       LG  L+ LG  
Sbjct: 4   ATFDGFGEAFDRCFGAGLCHVDAGSLEAAACSFRTAAAIRPEHPVAWFVLGLVLRGLGLR 63

Query: 86  DDAIEQFRNALTLAPSFPMAHYNLGNAYAAAGRHEDAADAFEKSLRLQPDDASSHNNFGN 145
           D A      A  L P      ++  +      R  +A     + + L+P    +  + GN
Sbjct: 64  DGAAVALWAAHRLRPDDADTLFHWASLLIECRRTGEAVAPLLRLVALRPGYPDAAFSLGN 123

Query: 146 ALHALGRHTEAIAAFRRTIELRPGHAGALNNMGMSLNALGRAEEAIPCFQTALAAEPRFV 205
           AL A+     A AA++  + L PG A A NN G +  + GR E+A   ++ A+  EP   
Sbjct: 124 ALMAVDEPERAEAAYQLAVLLEPGAAAANNNRGAAFLSQGRPEDAAVSYRRAVRLEPGSA 183

Query: 206 AAHFNLANTFDATGRHAEAVASFK 229
             H NL  +    G   E  A ++
Sbjct: 184 EHHKNLGVSLLTVGNFLEGTAEYE 207



 Score = 34.7 bits (78), Expect = 1e-05
 Identities = 48/181 (26%), Positives = 61/181 (33%), Gaps = 32/181 (17%)

Query: 243 FGMGNALAALGRHAEALPYLERAVGLDPQFALAWLSLGTAHQALGAHGPAVRALDQALRL 302
           FG G      G    A      A  + P+  +AW  LG   + LG    A  AL  A RL
Sbjct: 17  FGAGLCHVDAGSLEAAACSFRTAAAIRPEHPVAWFVLGLVLRGLGLRDGAAVALWAAHRL 76

Query: 303 RPDLASAHMNRALAWLAQRDFARGLPEYEWRLQTMAQPVIQTLPRWHGEPIAERTLLVHA 362
           RPD A                      + W     A  +I+   R  GE +A    LV  
Sbjct: 77  RPDDADT-------------------LFHW-----ASLLIEC--RRTGEAVAPLLRLVAL 110

Query: 363 EQGFGDTLQFVRFVPLVAQRAARVVLEVQPQLLPLLAPAAQAWR----VTLIAQGAPRPA 418
             G+ D    +    +      R   E   QL  LL P A A         ++QG P  A
Sbjct: 111 RPGYPDAAFSLGNALMAVDEPERA--EAAYQLAVLLEPGAAAANNNRGAAFLSQGRPEDA 168

Query: 419 A 419
           A
Sbjct: 169 A 169



 Score = 31.6 bits (70), Expect = 1e-04
 Identities = 22/73 (30%), Positives = 32/73 (43%)

Query: 20  AERGYRATLDGNPAHVDALHLLGVLRHQQGQHAEAAELVRRAVNLRPEDAALQLNLGNAL 79
           AE  Y+  +   P    A +  G     QG+  +AA   RRAV L P  A    NLG +L
Sbjct: 134 AEAAYQLAVLLEPGAAAANNNRGAAFLSQGRPEDAAVSYRRAVRLEPGSAEHHKNLGVSL 193

Query: 80  KALGQIDDAIEQF 92
             +G   +   ++
Sbjct: 194 LTVGNFLEGTAEY 206