Pairwise Alignments
Query, 615 a.a., tetratricopeptide repeat protein from Burkholderia phytofirmans PsJN
Subject, 541 a.a., TPR domain protein (NCBI) from Rhodospirillum rubrum S1H
Score = 236 bits (602), Expect = 2e-66
Identities = 172/475 (36%), Positives = 229/475 (48%), Gaps = 16/475 (3%)
Query: 149 ALGRHTEAIAAFRRTIELRPGHAGALNNMGMSLNALGRAEEAIPCFQTALAAEPRFVAAH 208
A GR A FRR + L+N+G++L G + A ++ L P+ A
Sbjct: 66 AEGRSAAAAGLFRRAMARCGDDPLMLHNLGVALRGAGLIDAAAAAWEGVLRGCPQRFATL 125
Query: 209 FNLANTFDATGRHAEAVASFKAALALQPNLPPAIFGMGNALAALGRHAEALPYLERAVGL 268
FNLA D GR EA+A ++ A P A + +GN LA G A+A L +A +
Sbjct: 126 FNLARLRDDQGRGEEALALYRRACLADPAASDAAYNLGNLLARRGALAQAAEVLGKAASV 185
Query: 269 DPQFALAWLSLGTAHQALGAHGPAVRALDQALRLRPDLASAHMNRALAWLAQRDFARGLP 328
P A +LG + LG A+ +A+ L PDLA A N A LA D+ G
Sbjct: 186 TPHDARIQTNLGIVLRRLGDAAGALACQRRAVALDPDLADAQWNLANLLLALDDYDEGFA 245
Query: 329 EYEWRLQTMAQPVIQ-TLPRWHGEPIAERTLLVHAEQGFGDTLQFVRFVPLVAQRAARVV 387
YEWR + ++ L W GE +A R LLV EQG GD +Q RF+P++A R ARV+
Sbjct: 246 RYEWRKRRAPWRLVDPPLAEWRGEDLAGRRLLVGLEQGAGDMIQAARFLPVLAGRGARVI 305
Query: 388 LEVQPQLLPLLAPAAQAWRVTLIAQGAPRPA-ADLHCPLLSLPLALGTTF-DTIPQRTPY 445
+E L LLA +++A GA A A H SLP LG F D PY
Sbjct: 306 VEAPDALAGLLATVDGV--ESVVAPGAWAAARATCHIRAFSLPYRLGLRFADLAATAGPY 363
Query: 446 LSVPAAYGRKWRGSLGGQAKRKIGIAWSGR--IQQNETRSMQLAALDPLFALEGIDWIVL 503
L VP GGQ +G+ WSG +N R+ LAA PL A+EG+ + L
Sbjct: 364 LRVPPRTPTPPALPPGGQGP-CVGLCWSGNPDFTENAVRAAPLAAFAPLTAVEGLTFFSL 422
Query: 504 QPELSAEERMALDTHPRAASIHRFDKRIGDFADTAAIIERLDAVVSIDTSIAHVAGALRK 563
Q + E A + D + D+A TAA + RLD VV+ DTS+AH+AGAL +
Sbjct: 423 QKGPAVAELAA-----SGLPVIDLDPWLVDYAATAAAMARLDMVVTTDTSVAHLAGALGR 477
Query: 564 PLWLMLPFAADWRWFAGETGSPWYPGATLVRQPQPGAWGDVV---EAVANALRKG 615
P L+L DWRW G SPWYP L+RQ + G W V A+ LR+G
Sbjct: 478 PCLLLLAAHCDWRWGIGRETSPWYPSLRLLRQERLGDWRAPVARAAALLAGLRRG 532
Score = 86.3 bits (212), Expect = 3e-21
Identities = 66/226 (29%), Positives = 97/226 (42%)
Query: 4 VFDRAFAAHRDGRLDDAERGYRATLDGNPAHVDALHLLGVLRHQQGQHAEAAELVRRAVN 63
+ +RA AA G A R L + H L +LG +G+ A AA L RRA+
Sbjct: 23 IAERAEAAWSRGDRHRAMTLARLGLGQDDGHPRLLAVLGAFEQAEGRSAAAAGLFRRAMA 82
Query: 64 LRPEDAALQLNLGNALKALGQIDDAIEQFRNALTLAPSFPMAHYNLGNAYAAAGRHEDAA 123
+D + NLG AL+ G ID A + L P +NL GR E+A
Sbjct: 83 RCGDDPLMLHNLGVALRGAGLIDAAAAAWEGVLRGCPQRFATLFNLARLRDDQGRGEEAL 142
Query: 124 DAFEKSLRLQPDDASSHNNFGNALHALGRHTEAIAAFRRTIELRPGHAGALNNMGMSLNA 183
+ ++ P + + N GN L G +A + + P A N+G+ L
Sbjct: 143 ALYRRACLADPAASDAAYNLGNLLARRGALAQAAEVLGKAASVTPHDARIQTNLGIVLRR 202
Query: 184 LGRAEEAIPCFQTALAAEPRFVAAHFNLANTFDATGRHAEAVASFK 229
LG A A+ C + A+A +P A +NLAN A + E A ++
Sbjct: 203 LGDAAGALACQRRAVALDPDLADAQWNLANLLLALDDYDEGFARYE 248
Score = 69.3 bits (168), Expect = 4e-16
Identities = 65/238 (27%), Positives = 92/238 (38%)
Query: 26 ATLDGNPAHVDALHLLGVLRHQQGQHAEAAELVRRAVNLRPEDAALQLNLGNALKALGQI 85
A +D +D + +G A L R + L LG +A G+
Sbjct: 11 AAMDSTDGPLDLIAERAEAAWSRGDRHRAMTLARLGLGQDDGHPRLLAVLGAFEQAEGRS 70
Query: 86 DDAIEQFRNALTLAPSFPMAHYNLGNAYAAAGRHEDAADAFEKSLRLQPDDASSHNNFGN 145
A FR A+ P+ +NLG A AG + AA A+E LR P ++ N
Sbjct: 71 AAAAGLFRRAMARCGDDPLMLHNLGVALRGAGLIDAAAAAWEGVLRGCPQRFATLFNLAR 130
Query: 146 ALHALGRHTEAIAAFRRTIELRPGHAGALNNMGMSLNALGRAEEAIPCFQTALAAEPRFV 205
GR EA+A +RR P + A N+G L G +A A + P
Sbjct: 131 LRDDQGRGEEALALYRRACLADPAASDAAYNLGNLLARRGALAQAAEVLGKAASVTPHDA 190
Query: 206 AAHFNLANTFDATGRHAEAVASFKAALALQPNLPPAIFGMGNALAALGRHAEALPYLE 263
NL G A A+A + A+AL P+L A + + N L AL + E E
Sbjct: 191 RIQTNLGIVLRRLGDAAGALACQRRAVALDPDLADAQWNLANLLLALDDYDEGFARYE 248
Score = 65.9 bits (159), Expect = 4e-15
Identities = 43/131 (32%), Positives = 66/131 (50%)
Query: 4 VFDRAFAAHRDGRLDDAERGYRATLDGNPAHVDALHLLGVLRHQQGQHAEAAELVRRAVN 63
+F+ A GR ++A YR +PA DA + LG L ++G A+AAE++ +A +
Sbjct: 125 LFNLARLRDDQGRGEEALALYRRACLADPAASDAAYNLGNLLARRGALAQAAEVLGKAAS 184
Query: 64 LRPEDAALQLNLGNALKALGQIDDAIEQFRNALTLAPSFPMAHYNLGNAYAAAGRHEDAA 123
+ P DA +Q NLG L+ LG A+ R A+ L P A +NL N A +++
Sbjct: 185 VTPHDARIQTNLGIVLRRLGDAAGALACQRRAVALDPDLADAQWNLANLLLALDDYDEGF 244
Query: 124 DAFEKSLRLQP 134
+E R P
Sbjct: 245 ARYEWRKRRAP 255