Pairwise Alignments

Query, 615 a.a., tetratricopeptide repeat protein from Burkholderia phytofirmans PsJN

Subject, 556 a.a., Tfp pilus assembly protein PilF from Dechlorosoma suillum PS

 Score =  330 bits (846), Expect = 1e-94
 Identities = 210/547 (38%), Positives = 278/547 (50%), Gaps = 19/547 (3%)

Query: 73  LNLGNALKALGQIDDAIEQFRNALTLAPSFPMAHYNLGNAYAAAGRHEDAADAFEKSLRL 132
           L  G    + G +  A + F  A  LAP     H+NLG      GR E A  A+EK+ +L
Sbjct: 8   LQQGQQRFSQGDMAGAEQAFAAAAQLAPQAWQVHFNLGMCRDRLGRREAAFTAYEKAYQL 67

Query: 133 QPDDASSHNNFGNALHALGRHTEAIAAFRRTIELRPGHAGALNNMGMSLNALGRAEEAIP 192
            PD      N       LG+   A+    R +EL PG+A A +N+G     LG+ E A  
Sbjct: 68  APDHVPCITNLAVNAFNLGKTEMALQLTLRQVELEPGNALAYDNLGQIFRQLGQYEGAEL 127

Query: 193 CFQTALAAEPRFVAAHFNLANTFDATGRHAEAVASFKAALALQPNLPPAIFGMGNALAAL 252
             + AL   P     H NL        + AEA  +F  AL L P    A+  +   L A 
Sbjct: 128 SLRNALLLAPDTPNLHNNLGLILLDQNKLAEAEQAFLQALRLAPQHADAMTNLSTVLQAQ 187

Query: 253 GRHAEALPYLERAVGLDPQFALAWLSLGTAHQALGAHGPAVRALDQALRLRPDLASAHMN 312
           GR AEAL +  RA  L P+ A+ W +LG   +++G H  A+ A  QA+ L PD A AH N
Sbjct: 188 GRTAEALEHCRRAAALAPRSAVTWTNLGNVLKSMGLHQEALEAQRQAIALAPDYALAHWN 247

Query: 313 RALAWLAQRDFARGLPEYEWRLQTMAQP-VIQTLPRWHGEPIAERTLLVHAEQGFGDTLQ 371
            A++ LA      G  EYEW      +     TLPRW GE +A + LL+ AEQG GDTLQ
Sbjct: 248 YAMSLLALGQLEAGWQEYEWGAAAGTRTRFAATLPRWQGEDLAGKHLLLRAEQGLGDTLQ 307

Query: 372 FVRFVPLVAQRAARVVLEVQPQLLPLLAPAAQAWRVTLIAQGAPRPAADLHC----PLLS 427
           FVRF P + +R A+V LE QP L+PLL   A      L+AQ    PA    C    PL+S
Sbjct: 308 FVRFAPELQRRGAKVTLECQPSLIPLLQGVAGIDH--LVAQTGELPADAWGCQCYLPLMS 365

Query: 428 LPLALGTTFDTIPQRTPYLSVPAAYGRKWRGSLGGQAKRKIGIAWSG--RIQQNETRSMQ 485
           LP  L      +P   PYL + A   R W+  LG +++ ++G+AW+G  R + +  RS  
Sbjct: 366 LPHLLHIGLADLPGPIPYLPLEAGRVRHWQDMLGPRSRFRVGLAWAGNPRHRNDHQRSCP 425

Query: 486 LAALDPLFALEGIDWIVLQPELSAEERMALDTHPRAASIHRFDKRIGDFADTAAIIERLD 545
           LA    L A+ G+++I LQ          L        +      I DFADTAAI+ +LD
Sbjct: 426 LAQFVELLAVPGVEFISLQ----------LPAAELPQGLRDVTAGIRDFADTAAIVSQLD 475

Query: 546 AVVSIDTSIAHVAGALRKPLWLMLPFAADWRWFAGETGSPWYPGATLVRQPQPGAWGDVV 605
            V+S+DT+I H+AGAL +P WL+LP  ADWRW      SPWYP   L RQ  PG W  V+
Sbjct: 476 LVISVDTAIIHLAGALGRPAWLLLPRDADWRWLQERQDSPWYPSLKLYRQKMPGQWLPVL 535

Query: 606 EAVANAL 612
           ++V   L
Sbjct: 536 QSVRRDL 542



 Score =  108 bits (271), Expect = 5e-28
 Identities = 73/216 (33%), Positives = 98/216 (45%)

Query: 5   FDRAFAAHRDGRLDDAERGYRATLDGNPAHVDALHLLGVLRHQQGQHAEAAELVRRAVNL 64
           F+      R GR + A   Y       P HV  +  L V     G+   A +L  R V L
Sbjct: 42  FNLGMCRDRLGRREAAFTAYEKAYQLAPDHVPCITNLAVNAFNLGKTEMALQLTLRQVEL 101

Query: 65  RPEDAALQLNLGNALKALGQIDDAIEQFRNALTLAPSFPMAHYNLGNAYAAAGRHEDAAD 124
            P +A    NLG   + LGQ + A    RNAL LAP  P  H NLG       +  +A  
Sbjct: 102 EPGNALAYDNLGQIFRQLGQYEGAELSLRNALLLAPDTPNLHNNLGLILLDQNKLAEAEQ 161

Query: 125 AFEKSLRLQPDDASSHNNFGNALHALGRHTEAIAAFRRTIELRPGHAGALNNMGMSLNAL 184
           AF ++LRL P  A +  N    L A GR  EA+   RR   L P  A    N+G  L ++
Sbjct: 162 AFLQALRLAPQHADAMTNLSTVLQAQGRTAEALEHCRRAAALAPRSAVTWTNLGNVLKSM 221

Query: 185 GRAEEAIPCFQTALAAEPRFVAAHFNLANTFDATGR 220
           G  +EA+   + A+A  P +  AH+N A +  A G+
Sbjct: 222 GLHQEALEAQRQAIALAPDYALAHWNYAMSLLALGQ 257



 Score =  105 bits (261), Expect = 7e-27
 Identities = 72/240 (30%), Positives = 109/240 (45%)

Query: 15  GRLDDAERGYRATLDGNPAHVDALHLLGVLRHQQGQHAEAAELVRRAVNLRPEDAALQLN 74
           G +  AE+ + A     P        LG+ R + G+   A     +A  L P+      N
Sbjct: 18  GDMAGAEQAFAAAAQLAPQAWQVHFNLGMCRDRLGRREAAFTAYEKAYQLAPDHVPCITN 77

Query: 75  LGNALKALGQIDDAIEQFRNALTLAPSFPMAHYNLGNAYAAAGRHEDAADAFEKSLRLQP 134
           L      LG+ + A++     + L P   +A+ NLG  +   G++E A  +   +L L P
Sbjct: 78  LAVNAFNLGKTEMALQLTLRQVELEPGNALAYDNLGQIFRQLGQYEGAELSLRNALLLAP 137

Query: 135 DDASSHNNFGNALHALGRHTEAIAAFRRTIELRPGHAGALNNMGMSLNALGRAEEAIPCF 194
           D  + HNN G  L    +  EA  AF + + L P HA A+ N+   L A GR  EA+   
Sbjct: 138 DTPNLHNNLGLILLDQNKLAEAEQAFLQALRLAPQHADAMTNLSTVLQAQGRTAEALEHC 197

Query: 195 QTALAAEPRFVAAHFNLANTFDATGRHAEAVASFKAALALQPNLPPAIFGMGNALAALGR 254
           + A A  PR      NL N   + G H EA+ + + A+AL P+   A +    +L ALG+
Sbjct: 198 RRAAALAPRSAVTWTNLGNVLKSMGLHQEALEAQRQAIALAPDYALAHWNYAMSLLALGQ 257



 Score = 75.5 bits (184), Expect = 6e-18
 Identities = 42/112 (37%), Positives = 60/112 (53%)

Query: 16  RLDDAERGYRATLDGNPAHVDALHLLGVLRHQQGQHAEAAELVRRAVNLRPEDAALQLNL 75
           +L +AE+ +   L   P H DA+  L  +   QG+ AEA E  RRA  L P  A    NL
Sbjct: 155 KLAEAEQAFLQALRLAPQHADAMTNLSTVLQAQGRTAEALEHCRRAAALAPRSAVTWTNL 214

Query: 76  GNALKALGQIDDAIEQFRNALTLAPSFPMAHYNLGNAYAAAGRHEDAADAFE 127
           GN LK++G   +A+E  R A+ LAP + +AH+N   +  A G+ E     +E
Sbjct: 215 GNVLKSMGLHQEALEAQRQAIALAPDYALAHWNYAMSLLALGQLEAGWQEYE 266