Pairwise Alignments

Query, 615 a.a., tetratricopeptide repeat protein from Burkholderia phytofirmans PsJN

Subject, 603 a.a., hypothetical protein from Herbaspirillum seropedicae SmR1

 Score =  291 bits (745), Expect = 5e-83
 Identities = 205/630 (32%), Positives = 298/630 (47%), Gaps = 55/630 (8%)

Query: 2   QPVFDRAFAAHRDGRLDDAERGYRATLDGNPAHVDALHLLGVLR-HQQGQHAEAAELVRR 60
           Q +  +A A H+ G+L  AE  Y+  L   P H +A +L G+L+ HQ+      A+L + 
Sbjct: 9   QILLQKALALHQKGQLAPAEELYKKVLVKLPRHFEANYLYGMLKLHQEDWETAEAQLAK- 67

Query: 61  AVNLRPEDAALQLNLGNALKALGQIDDAIEQFRNALTLAPSFPMAHYNLGNAYAAAGRHE 120
                                             A+ L P     +++   A A  GR +
Sbjct: 68  ----------------------------------AIELNPDHLDTYFDHAGALAHLGRDD 93

Query: 121 DAADAFEKSLRLQPDDASSHNNFGNALHALGRHTEAIAAFRRTIELRPGHAGALNNMGMS 180
           +A   ++  L +  D   +    G AL  LGR+ EA+A   R   L P +A A    G  
Sbjct: 94  EAVARYDLVLTVNADFVEALLARGAALRRLGRNREALADLERATALAPDNADAWFQRGNV 153

Query: 181 LNALGRAEEAIPCFQTALAAEPRFVAAHFNLANTFDATGRHAEAVASFKAALALQPNLPP 240
           L+      +A   ++ A+A  P F+ A FNL NT     +  +A+ ++  AL +QP+   
Sbjct: 154 LHDSYAYGDARESYERAVALRPDFIEAWFNLGNTCKDGNQLDQALRAYDRALEVQPDFFE 213

Query: 241 AIFGMGNALAALGRHAEALPYLERAVGLDPQFALAWLSLGTAHQALGAHGPAVRALDQAL 300
           AI   G  L  + R AEAL   +RA+ LD +    W + G+  + L     A  +  +A 
Sbjct: 214 AISNRGYVLFKMQRPAEALQAYDRALALDERAPDLWFNRGSTLEQLYRFEEASESYRRAK 273

Query: 301 RLRPDLASAHMNRALAWLAQRDFARGLPEYE--WRLQTMAQPVIQTL-PRWHGE-PIAER 356
            L+PD  SA  N AL  L Q DF  G   +E  W  + M     Q + P W GE P+  +
Sbjct: 274 ALKPDAGSATWNEALMQLRQGDFVNGWKGFETRWATEQMRGQQRQFMQPLWLGEQPLEGK 333

Query: 357 TLLVHAEQGFGDTLQFVRFVPLVAQRAARVVLEVQPQLLPLLAPAAQAWRVTLIAQGAPR 416
           T+L+HAEQGFGDTLQFVR+ PL+A R ARV+LEVQP L   LA      +V +      R
Sbjct: 334 TILLHAEQGFGDTLQFVRYAPLLAARGARVILEVQPALTRQLAGLPGVTQV-IGTDHFMR 392

Query: 417 PAADLHCPLLSLPLALGTTFDTIPQRTPYLSVPAAYGRKWRGSLGGQAKRKIGIAWSGRI 476
           P  D HCPL+SLPLA  T  +    R PYL   A+    W   L      ++G+ W+G  
Sbjct: 393 PPFDFHCPLMSLPLACKTFSEADIPRAPYLLPEASSWAAWHQRLPRNRALRVGLVWAGSS 452

Query: 477 QQNE--------TRSMQLAALDPLFAL----EGIDWIVLQPELSAEERMALDTHPRAASI 524
            Q           RS+  A L PL  L      +++  LQ  +  +    L  HP A+ +
Sbjct: 453 AQTHPDAVRIDGERSLPFATLAPLVELAREHAALEFYSLQ--VGQDAVAQLHAHPLASLV 510

Query: 525 HRFDKRIGDFADTAAIIERLDAVVSIDTSIAHVAGALRKPLWLMLPFAADWRWFAGETGS 584
                 + DFA+T A++  LD ++++DTS+ H+AGAL +P+WL+      WRW      S
Sbjct: 511 RDCSPELHDFAETGALLANLDLLITVDTSVCHLAGALGRPVWLLNRHNGCWRWQVEREDS 570

Query: 585 PWYPGATLVRQPQPGAWGDVVEAVANALRK 614
           PWY G T+  Q   G W +V+  V  AL++
Sbjct: 571 PWYGGMTIFGQRTAGQWDEVIARVRAALQQ 600