Pairwise Alignments

Query, 615 a.a., tetratricopeptide repeat protein from Burkholderia phytofirmans PsJN

Subject, 658 a.a., hypothetical protein from Herbaspirillum seropedicae SmR1

 Score =  274 bits (700), Expect = 1e-77
 Identities = 190/615 (30%), Positives = 299/615 (48%), Gaps = 23/615 (3%)

Query: 16  RLDDAERGYRATLDGNPAHVDALHLLGVLRHQQGQHAEAAELVRRAVNLRPEDAALQLNL 75
           + D+A+    A L  NP  V A H  G++   +G+ A+A   +R+A+   PE+A    NL
Sbjct: 39  KTDEAKALCMAVLSRNPTLVFANHARGLVAMHEGKFADAEAYLRKAIEADPENAEYMSNL 98

Query: 76  GNALKALGQIDDAIEQFRNALTLAPSFPMAHYNLGNAYAAAGRHEDAADAFEKSLRLQPD 135
              + +  +ID+AI  + +A+ +      +   L NA       E +   FE +++ +P+
Sbjct: 99  AGTVLSQDRIDEAIALYEHAIRIDRDHRASRIGLANALHEKNDPEASVAYFEDAVKREPN 158

Query: 136 DASSHNNFGNALHALGRHTEAIAAFRRTIELRPGHAGALNNMGMSLNALGRAEEAIPCFQ 195
                ++ G AL    R+ EA+A   +++EL+   A +   +G + +A+   +EAI   +
Sbjct: 159 APGPLSHLGRALIECKRYNEAVAVILKSLELQISFAPSHTALGEAFHAMEMYKEAIESHK 218

Query: 196 TALAAEPRFVAAHFNLANTFDATGRHAEAVASFKAALALQPNLPPAIFGMGNA-LAALGR 254
           TA+  +P+   AH  +A+++    R  EA       + + P  P A   +G++  +   R
Sbjct: 219 TAILLDPQDTYAHNKIADSYLKLNRIDEAHEHLLRVIEIAPKDPNAYVKLGSSYFSTSDR 278

Query: 255 HAEALPYLERAVGLDPQFALAWLSLGTAHQALGAHGPAVRALDQALRLRPDLASAHMNRA 314
             +A+    +A+ +D + AL + ++G      G    A+    +AL LRP+  +A  N A
Sbjct: 279 FDDAMRMFNKALEVDSKHALTYNNIGAIQHDHGDLEDAIGNFRKALELRPNYPTARHNIA 338

Query: 315 LAWLAQRDFARGLPEYEWRLQT--------MAQPVIQTLPRWHGEP-IAERTLLVHAEQG 365
           L+ L Q     G   +E RL T        +   +   +P+W G+  +A + +L+  EQG
Sbjct: 339 LSLLLQGHLKEGWECHESRLVTRERSHVYRLIHKLFDLIPKWDGKSSLAGKYILLMHEQG 398

Query: 366 FGDTLQFVRFVPLVAQRAARVVLEVQPQLLPLLAPAAQAWRVTLIAQGAPRPAADLHCPL 425
           FGD++QF+R+V +V  + ARV L V+  L  L    +    VTL+ +  P P  D    L
Sbjct: 399 FGDSIQFLRYVRMVLDQGARVALHVKNPLYRLFQSYSP--EVTLVRESDPLPPCDCAYVL 456

Query: 426 LSLPLALGT-TFDTIPQRTP-YLS----VPAAYGRKWRGSLGGQAKRKIGIAWSGRIQQN 479
           +SLP A+GT T D IP     YLS    + +++G K R       K ++G+ W G  +  
Sbjct: 457 MSLPYAMGTDTVDDIPSVPGGYLSADPILKSSWGEKIRQLSQSPEKLRVGVVWGGNPEHG 516

Query: 480 ETRSMQLAA--LDPLFALEGIDWIVLQPELSAEERMALDTHPRAASIHRFDKRIGDFADT 537
             R   +A      LF L  I++  LQ     +   AL   P    I        DFADT
Sbjct: 517 NDRHRSIAMDKFATLFQLPNIEFYSLQKGKPLDAFKAL---PPGLPIFNLGDDCQDFADT 573

Query: 538 AAIIERLDAVVSIDTSIAHVAGALRKPLWLMLPFAADWRWFAGETGSPWYPGATLVRQPQ 597
           AA I  LD VVS+DTS+ H+AGAL  P W++LP   DWRW      SPWYPG  L RQP 
Sbjct: 574 AAAIANLDLVVSVDTSVVHLAGALGHPTWVLLPHVPDWRWLQDREDSPWYPGMRLFRQPA 633

Query: 598 PGAWGDVVEAVANAL 612
              W  V+  V   L
Sbjct: 634 LSDWESVLTKVGQEL 648