Pairwise Alignments

Query, 615 a.a., tetratricopeptide repeat protein from Burkholderia phytofirmans PsJN

Subject, 539 a.a., tetratricopeptide (TPR) repeat protein from Paraburkholderia graminis OAS925

 Score =  249 bits (637), Expect = 2e-70
 Identities = 173/498 (34%), Positives = 236/498 (47%), Gaps = 8/498 (1%)

Query: 116 AGRHEDAADAFEKSLRLQPDDASSHNNFGNALHALGRHTEAIAAFRRTIELRPGHAGALN 175
           AGR +DAA      L+  PD   +    G      G H  A     +  E        L 
Sbjct: 35  AGRLDDAASLLHGILKTAPDHGEALTGLGYIAAQQGDHARAADYLIQASERASLSWHQLK 94

Query: 176 NMGMSLNALGRAEEAIPCFQTALAAEPRFVAAHFNLANTFDATGRHAEAVASFKAALALQ 235
                     R + AI   +  LA      AA   +A +    G+   A+  F     + 
Sbjct: 95  FAAQVCRLAQRRDAAIALLERCLAQCRNDAAALHGVAVSLIELGQSQRALEVFVHLCKVH 154

Query: 236 PNLPPAIFGMGNALAALGRHAEALPYLERAVGLDPQFALAWLSLGTAHQALGAHGPAVRA 295
           P L  A +  G  L  +GR+ + L    +A+ L P+F  A+++LG A + L     A+  
Sbjct: 155 PQLAEAHYNRGTLLGTMGRYDDELDAYRQAIALKPRFVRAYVNLGVALRDLRRFDEALLQ 214

Query: 296 LDQALRLRPDLASAHMNRALAWLAQRDFARGLPEYEWRLQT-MAQPVIQTLPRWHG-EPI 353
             +AL + P+ A A  NRA   L   +F  G  EYEWR +             W G +PI
Sbjct: 215 FRKALSIDPNDAGARTNRAQTNLLLGEFEHGWREYEWRWRDGTGDHGFPQHSLWTGAQPI 274

Query: 354 AERTLLVHAEQGFGDTLQFVRFVPLVAQRAARVVLEVQPQLLPLLAPAAQAWRVTLIAQG 413
             +T+LVH EQGFGDTLQFVRFV  ++   A VVL VQ  LLPLL     A  V  I + 
Sbjct: 275 GGKTVLVHHEQGFGDTLQFVRFVDQLSAAGAHVVLRVQDALLPLLRHYPGAAEV--IGET 332

Query: 414 APRPAADLHCPLLSLPLALGTTFDTIPQRTPYLSVPAAYGRKWRGSLGGQAKR-KIGIAW 472
                 D H P +SLP AL           PYL       R+W   L    +R +IGI W
Sbjct: 333 DQVKHFDYHIPTMSLPFALKVGTPGPALSGPYLQADEELVRQWDELLPVSRRRPRIGIVW 392

Query: 473 SGRIQQ--NETRSMQLAALDPLFALEGIDWIVLQPELSAEERMALDTHPRAASIHRFDKR 530
           SG      +  RS+ L  L P+F  +  ++  LQP++   +R  L    ++ ++     R
Sbjct: 393 SGSCTHLNDHNRSIPLEQLKPVFETDA-EFFALQPDVRDSDRACLAQLEQSGALRDVSGR 451

Query: 531 IGDFADTAAIIERLDAVVSIDTSIAHVAGALRKPLWLMLPFAADWRWFAGETGSPWYPGA 590
           +  FA+TAA+I RLD VVS+DT++AH+AGAL KP+W+ LPF  DWRW    + SPWY  A
Sbjct: 452 LTSFAETAALIARLDLVVSVDTAVAHLAGALGKPVWIALPFMPDWRWQLDRSDSPWYANA 511

Query: 591 TLVRQPQPGAWGDVVEAV 608
            L RQ   G W DVV+A+
Sbjct: 512 RLFRQTTRGDWTDVVDAL 529



 Score = 85.9 bits (211), Expect = 4e-21
 Identities = 63/208 (30%), Positives = 87/208 (41%), Gaps = 34/208 (16%)

Query: 15  GRLDDAERGYRATLDGNPAHVDALHLLGVLRHQQGQHAEAAE------------------ 56
           GRLDDA       L   P H +AL  LG +  QQG HA AA+                  
Sbjct: 36  GRLDDAASLLHGILKTAPDHGEALTGLGYIAAQQGDHARAADYLIQASERASLSWHQLKF 95

Query: 57  ----------------LVRRAVNLRPEDAALQLNLGNALKALGQIDDAIEQFRNALTLAP 100
                           L+ R +     DAA    +  +L  LGQ   A+E F +   + P
Sbjct: 96  AAQVCRLAQRRDAAIALLERCLAQCRNDAAALHGVAVSLIELGQSQRALEVFVHLCKVHP 155

Query: 101 SFPMAHYNLGNAYAAAGRHEDAADAFEKSLRLQPDDASSHNNFGNALHALGRHTEAIAAF 160
               AHYN G      GR++D  DA+ +++ L+P    ++ N G AL  L R  EA+  F
Sbjct: 156 QLAEAHYNRGTLLGTMGRYDDELDAYRQAIALKPRFVRAYVNLGVALRDLRRFDEALLQF 215

Query: 161 RRTIELRPGHAGALNNMGMSLNALGRAE 188
           R+ + + P  AGA  N   +   LG  E
Sbjct: 216 RKALSIDPNDAGARTNRAQTNLLLGEFE 243



 Score = 46.2 bits (108), Expect = 4e-09
 Identities = 28/97 (28%), Positives = 47/97 (48%)

Query: 31  NPAHVDALHLLGVLRHQQGQHAEAAELVRRAVNLRPEDAALQLNLGNALKALGQIDDAIE 90
           +P   +A +  G L    G++ +  +  R+A+ L+P      +NLG AL+ L + D+A+ 
Sbjct: 154 HPQLAEAHYNRGTLLGTMGRYDDELDAYRQAIALKPRFVRAYVNLGVALRDLRRFDEALL 213

Query: 91  QFRNALTLAPSFPMAHYNLGNAYAAAGRHEDAADAFE 127
           QFR AL++ P+   A  N        G  E     +E
Sbjct: 214 QFRKALSIDPNDAGARTNRAQTNLLLGEFEHGWREYE 250



 Score = 33.9 bits (76), Expect = 2e-05
 Identities = 22/78 (28%), Positives = 33/78 (42%)

Query: 15  GRLDDAERGYRATLDGNPAHVDALHLLGVLRHQQGQHAEAAELVRRAVNLRPEDAALQLN 74
           GR DD    YR  +   P  V A   LGV      +  EA    R+A+++ P DA  + N
Sbjct: 172 GRYDDELDAYRQAIALKPRFVRAYVNLGVALRDLRRFDEALLQFRKALSIDPNDAGARTN 231

Query: 75  LGNALKALGQIDDAIEQF 92
                  LG+ +    ++
Sbjct: 232 RAQTNLLLGEFEHGWREY 249