Pairwise Alignments

Query, 615 a.a., tetratricopeptide repeat protein from Burkholderia phytofirmans PsJN

Subject, 603 a.a., tetratricopeptide (TPR) repeat protein from Paraburkholderia graminis OAS925

 Score =  343 bits (880), Expect = 1e-98
 Identities = 219/614 (35%), Positives = 299/614 (48%), Gaps = 47/614 (7%)

Query: 8   AFAAHRDGRLDDAERGYRATLDGNPAHVDALHLLGVLRHQQGQHAEAAELVRRAVNLRPE 67
           A  AH+ GRLD A+  YR  L  +PA+  ALH  GVL +Q+GQHA+AA L+  A+     
Sbjct: 30  ALDAHQAGRLDTADSIYREVLAIDPANARALHYFGVLHYQRGQHADAATLMSHALKHDRH 89

Query: 68  DAALQLNLGNALKALGQIDDAIEQFRNALTLAPSFPMAHYNLGNAYAAAGRHEDAADAFE 127
           DAA   N G A  ALG +D+A   +  AL L P F  A  N G A  A G   +A + + 
Sbjct: 90  DAACWSNRGLAAAALGYLDEATICYDQALQLQPDFADARNNFGVALQAQGALNEAVEQYR 149

Query: 128 KSLRLQPDDASSHNNFGNALHALGRHTEAIAAFRRTIELRPGHAGALNNMGMSLNALGRA 187
            ++   P    +H N G AL  LG  TEA+A +R  ++L    A A  N G + NALG  
Sbjct: 150 LAIASNPAFVDAHLNLGTALGKLGNFTEALACYRDALQLDANSAEAHFNAGNAHNALGEH 209

Query: 188 EEAIPCFQTALAAEPRFVAAHFNLANTFDATGRHAEAVASFKAALALQPNLPPAIFGMGN 247
           E A+  F+ ALA  P +  AH NL +     G +A A + ++ A+AL PN P  +  +G 
Sbjct: 210 EAAVASFERALALRPDYAEAHINLGSAIGKRGDYAGAESHYRRAVALNPN-PTNLVCLGG 268

Query: 248 ALAALGRHAEALPYLERAVGLDPQFALAWLSLGTAHQALGAHGPAVRALDQALRLRPDLA 307
           +L A GR  E   +   A+  +P                                  D A
Sbjct: 269 SLGAQGRLDEEETFYRDALAREP----------------------------------DYA 294

Query: 308 SAHMNRALAWLAQRDFARGLPEY--EWRLQTMAQPVIQTLPRWHGEPIAERTLLVHAEQG 365
            AH N A   L + D+ +G  E+   WR        +  +  W GEP+  R LL+  EQG
Sbjct: 295 DAHQNLAWLLLKRGDYKQGWAEFALRWRKSDYDALALPGVAEWRGEPLEGRRLLIVGEQG 354

Query: 366 FGDTLQFVRFVPLVAQRAARVVLEVQPQLLPLLAPAAQAWRVTLIAQGAPRPAADLHCPL 425
           FGD  QF+R+  ++ +R A V + V+  LL L+       R      G P    D   P+
Sbjct: 355 FGDHFQFLRYARVLHERGATVDVCVREPLLRLVQRVPGVHRA---FAGKPDADYDFWVPM 411

Query: 426 LSLPLALGTTFDTIPQRTPYLSVPAAYGRKWRGSL--GGQAKRKIGIAWSGR--IQQNET 481
           +S+P  +G    +IP + PYL    A    WR  L   G+ KRK+G+ W+G      +  
Sbjct: 412 MSVPSCVGAELSSIPAQMPYLFADNAKVDAWRKKLQTSGKTKRKVGLVWAGSPVFGNDRY 471

Query: 482 RSMQLAALDPLFALEGIDWIVLQPELSAEERMALDTHPRAASIHRFDKRIGDFADTAAII 541
           RSM LA L  L  +  + W  LQ          L   P A   H F   + DF DTAA+I
Sbjct: 472 RSMALADLHTLADVAKVSWYPLQ---KGPAHAQLAEAPEAFRAHDFSGELNDFEDTAALI 528

Query: 542 ERLDAVVSIDTSIAHVAGALRKPLWLMLPFAADWRWFAGETGSPWYPGATLVRQPQPGAW 601
             LD V+++DT +AH+AGAL KP+WL+LP  +DWRW    + SPWYP   L RQ   G W
Sbjct: 529 MNLDLVIAVDTGVAHLAGALGKPVWLLLPANSDWRWLEARSDSPWYPRMRLFRQQVLGDW 588

Query: 602 GDVVEAVANALRKG 615
             VV  V +AL+ G
Sbjct: 589 AGVVREVVSALKTG 602



 Score =  127 bits (318), Expect = 2e-33
 Identities = 84/223 (37%), Positives = 113/223 (50%), Gaps = 1/223 (0%)

Query: 6   DRAFAAHRDGRLDDAERGYRATLDGNPAHVDALHLLGVLRHQQGQHAEAAELVRRAVNLR 65
           +R  AA   G LD+A   Y   L   P   DA +  GV    QG   EA E  R A+   
Sbjct: 96  NRGLAAAALGYLDEATICYDQALQLQPDFADARNNFGVALQAQGALNEAVEQYRLAIASN 155

Query: 66  PEDAALQLNLGNALKALGQIDDAIEQFRNALTLAPSFPMAHYNLGNAYAAAGRHEDAADA 125
           P      LNLG AL  LG   +A+  +R+AL L  +   AH+N GNA+ A G HE A  +
Sbjct: 156 PAFVDAHLNLGTALGKLGNFTEALACYRDALQLDANSAEAHFNAGNAHNALGEHEAAVAS 215

Query: 126 FEKSLRLQPDDASSHNNFGNALHALGRHTEAIAAFRRTIELRPGHAGALNNMGMSLNALG 185
           FE++L L+PD A +H N G+A+   G +  A + +RR + L P     L  +G SL A G
Sbjct: 216 FERALALRPDYAEAHINLGSAIGKRGDYAGAESHYRRAVALNPNPTN-LVCLGGSLGAQG 274

Query: 186 RAEEAIPCFQTALAAEPRFVAAHFNLANTFDATGRHAEAVASF 228
           R +E    ++ ALA EP +  AH NLA      G + +  A F
Sbjct: 275 RLDEEETFYRDALAREPDYADAHQNLAWLLLKRGDYKQGWAEF 317



 Score = 52.8 bits (125), Expect = 4e-11
 Identities = 41/131 (31%), Positives = 57/131 (43%), Gaps = 2/131 (1%)

Query: 210 NLANTFDATGRHAEAVASFKAALALQPNLPPAIFGMGNALAALGRHAEALPYLERAVGLD 269
           N A      GR   A + ++  LA+ P    A+   G      G+HA+A   +  A+  D
Sbjct: 28  NAALDAHQAGRLDTADSIYREVLAIDPANARALHYFGVLHYQRGQHADAATLMSHALKHD 87

Query: 270 PQFALAWLSLGTAHQALGAHGPAVRALDQALRLRPDLASAHMNRALAWLAQRDFARGLPE 329
              A  W + G A  ALG    A    DQAL+L+PD A A  N  +A  AQ      + +
Sbjct: 88  RHDAACWSNRGLAAAALGYLDEATICYDQALQLQPDFADARNNFGVALQAQGALNEAVEQ 147

Query: 330 YEWRLQTMAQP 340
           Y  RL   + P
Sbjct: 148 Y--RLAIASNP 156



 Score = 43.9 bits (102), Expect = 2e-08
 Identities = 38/133 (28%), Positives = 57/133 (42%), Gaps = 1/133 (0%)

Query: 5   FDRAFAAHRDGRLDDAERGYRATLDGNPAHVDALHLLGVLRHQQGQHAEAAELVRRAVNL 64
           F+   A +  G  + A   +   L   P + +A   LG    ++G +A A    RRAV L
Sbjct: 197 FNAGNAHNALGEHEAAVASFERALALRPDYAEAHINLGSAIGKRGDYAGAESHYRRAVAL 256

Query: 65  RPEDAALQLNLGNALKALGQIDDAIEQFRNALTLAPSFPMAHYNLGNAYAAAGRHEDAAD 124
            P    L + LG +L A G++D+    +R+AL   P +  AH NL       G ++    
Sbjct: 257 NPNPTNL-VCLGGSLGAQGRLDEEETFYRDALAREPDYADAHQNLAWLLLKRGDYKQGWA 315

Query: 125 AFEKSLRLQPDDA 137
            F    R    DA
Sbjct: 316 EFALRWRKSDYDA 328