Pairwise Alignments

Query, 982 a.a., formate dehydrogenase subunit alpha from Burkholderia phytofirmans PsJN

Subject, 1432 a.a., formate dehydrogenase, alpha subunit (RefSeq) from Shewanella sp. ANA-3

 Score =  549 bits (1414), Expect = e-160
 Identities = 300/833 (36%), Positives = 454/833 (54%), Gaps = 39/833 (4%)

Query: 143  LDCLTCPANGDCELQDMAGVTGLREVRYGFDGANHLKDKKDESNPYFTYDASKCIVCNRC 202
            L+C  C AN DC+L+D A   G+       + A H     D+S P+  +DA++CI C +C
Sbjct: 605  LEC-ACQANTDCKLRDYATDYGVEAKSLATENARHFS--VDKSAPFIQFDANRCISCGKC 661

Query: 203  VRACEETQGTFALTIAGRGFES--------------RVAASENVPFMESECVSCGACVAA 248
            V  C++  G  A+  +   +++              RV  S ++   +S CV CG CV  
Sbjct: 662  VDVCQQQSGHCAIQFSQDSYQALPQEMTQHMERRAPRVGFSASMA--DSHCVQCGNCVQV 719

Query: 249  CPTATLQEKTVIMLGQAEH--SVVTTCAYCGVGC--SFKAEMKGNEVVRMVPHKNGQANE 304
            CPT  L +      G      +  T C YCGVGC    K +   N +  +  +K+   N+
Sbjct: 720  CPTGALVDARDKRQGDCTELKTASTICTYCGVGCRLDLKIDPNANRIRHIEGNKDSVVNQ 779

Query: 305  GHACVKGRFAWGYATHKDRITKPMIRAKITDPWREVSWEEALTYAASEFRRIQAKHGRDS 364
            G  CVKGRF + +     R+T P+IR       +  SW EA+ Y A     I+ K G ++
Sbjct: 780  GMLCVKGRFGFDFIHSDKRLTTPLIRKN--GELQPSSWPEAIAYVAKRLTEIKQKDGSNA 837

Query: 365  IGGITSSRCTNEETYLVQKLVRAAFGNNNVDTCARVCHSPTGYGLKTTLGESAGTQTFAS 424
            +  + S++ TNE+ +++QK VR+  G NN+D CAR+CHS T  GL+ ++G  A T    S
Sbjct: 838  LASLASAKATNEDNFVLQKFVRSVLGTNNIDHCARLCHSSTVTGLQQSIGSGAMTNDIPS 897

Query: 425  VDKADVIMVIGANPTDGHPVFGSRLKRRVRE-GAKLIVVDPRRIDIVDTPHVKASHHLQL 483
            +  +DVI ++G++ T  HP+  S++++ V + GA+L+V DP+R+ I +   +  +H    
Sbjct: 898  IKDSDVIFILGSDTTCAHPIIASKIQQAVMQHGARLLVADPKRVGIAEKAELYVAH---- 953

Query: 484  RPGTNVAVVNALAHVIVTEGLVNEAFVAERCETRAFEQWRDFVALPENAPEATEAVTGVP 543
            RPGT+V ++NA+   I+     ++A++AER  T   E     +A  + + E    +TGV 
Sbjct: 954  RPGTDVMLLNAIMAEIIRHDWQDKAYIAER--TEGIEALYAELAKDDYSLENAALITGVK 1011

Query: 544  AQFVREAARIYATGGNAAIYYGLGVTEHAQGSTMVMGIANLAMATGNIGREGVGVNPLRG 603
            A+ +   AR   T    A+YY +G+T+H  G   V  I+NL +  GNIG  G G+NPLRG
Sbjct: 1012 AEDIARLARTIGTAEKTAVYYAMGITQHTTGHDNVTAISNLQLLCGNIGVSGAGINPLRG 1071

Query: 604  QNNVQGSCDMGSFPHELPGYRHISDTVTRTLFEDAWNVTLQPEPGLRIPNMFDAAVHGTF 663
            Q+NVQG+CDMG+ P+   GY+ ++D   R  FE+ W   L  E G+   +M      G  
Sbjct: 1072 QSNVQGACDMGALPNYFTGYQKVTDLHARMRFENHWQTRLSGEIGVTATHMMHDIAKGKI 1131

Query: 664  KGLYCQGEDIVQSDPNTHHVSAALSSMECIVVQDIFLNETAKYAHVLLPGSSFLEKDGTF 723
            K LY  GE+ V SDP+  HV  ALS +E +VVQDIFL ETA+ AHV+LP ++F+EK G F
Sbjct: 1132 KALYVMGENPVLSDPDQAHVLNALSQIEFLVVQDIFLTETAELAHVVLPAAAFVEKRGHF 1191

Query: 724  TNAERRISRVRKVM-PPVPGYADWEVTVMLSRALGYEMDYTHPSQIMDEIARLTPTFHGV 782
            TN ERR+ R+ + +  P     DW++   ++ A+G   DYT+   I  EI  LTP + G+
Sbjct: 1192 TNTERRVQRLEQALASPGEALPDWQIVQAVANAMGANWDYTNEEAIWREINELTPQYRGI 1251

Query: 783  SYKKLDEMG------SIQWPCNEDAPDGTPTMHIDSFVRGKGKFVITKFIATPEKVTRKF 836
             + +L           IQWPC ++   GTP MH   F RG G F    +    E    ++
Sbjct: 1252 RWDRLSANAEGQISQGIQWPCPDETHPGTPIMHQSQFTRGLGLFTPVSYRLPAEMPCNEY 1311

Query: 837  PMLLTTGRILSQYNVGAQTRRTENSRWHDEDRLEIHPHDAEERGIKTDDWVGIESRAGQT 896
            P+ L+TGR+L Q++ G  TR+T         ++ I  +DAE+ GI   D + + +R G+ 
Sbjct: 1312 PLTLSTGRLLEQFHTGTLTRKTPGLDLLGAPKVMISVYDAEQLGINNGDKLRLTTRRGEI 1371

Query: 897  VLRAKVTERMQPGVVYTTFHFPESGANVITTDSSDWATNCPEYKVTAVQVMPV 949
             + A VT+R Q GV++  FHF E+ AN +T ++ D     PEYKV AV+   V
Sbjct: 1372 EIDAFVTKRAQAGVLFLPFHFVEAAANKLTINALDPVAYIPEYKVCAVRAEKV 1424



 Score = 69.7 bits (169), Expect = 1e-15
 Identities = 45/124 (36%), Positives = 63/124 (50%), Gaps = 17/124 (13%)

Query: 49  ITLEIDGQSVTVPAGTSVMRAAVEAGVNVPKLC-ATDSLEPFGS--------CRLCLVEI 99
           I L+ID  SVT     ++++AA +AG+ +P LC  TD+    G+        C LCLV+I
Sbjct: 2   IELKIDNHSVTAEPNDNLLQAARKAGIAIPSLCDPTDATRQLGTAPNADKQDCNLCLVQI 61

Query: 100 EGKRGY---PASCTTPVEAGMKVRTQTDRLQSLRRNVMELYISDHPLDC-----LTCPAN 151
           E          +C TP EAG+KV TQ+  L   R+  +   +SDH  DC       CPA 
Sbjct: 62  ENTDASLRCVKACETPAEAGLKVITQSAYLTKQRQAALSTILSDHFADCEAPCQQACPAG 121

Query: 152 GDCE 155
            D +
Sbjct: 122 VDVQ 125