Pairwise Alignments

Query, 596 a.a., acyl-CoA dehydrogenase from Burkholderia phytofirmans PsJN

Subject, 592 a.a., acyl-CoA dehydrogenase domain protein (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  460 bits (1183), Expect = e-134
 Identities = 259/601 (43%), Positives = 362/601 (60%), Gaps = 17/601 (2%)

Query: 2   SYTAPIKDMLFVMKELAGLEDIATLPGFEDANLETAQAVLEESAKLCGSVLAPLNVEGDR 61
           +YTAP KDM F++ ++  +     +PG+++ + +   AVL+E+ KL   VL PLN  GD+
Sbjct: 3   TYTAPTKDMQFLLHDVLQVSQ-NDIPGYDELDRDFTGAVLDEAGKLAMEVLHPLNTVGDQ 61

Query: 62  NPSSWKDGVVTATPGFREAFRQFGEGGWQGVQHPVDYEGQGLPKLIATPCVEMLNASNLS 121
                ++GVV    GF++A++   +GGW G+    +Y GQG+P ++ T   EM +A+N++
Sbjct: 62  QGCVLENGVVRTPEGFKDAYKIMCDGGWTGLDMDPEYGGQGMPYILQTATGEMFSAANMA 121

Query: 122 FALCPLLTDGAIEALLTAGTEAQKQTYVPKLISGEWTGTMNLTEPQAGSDLALVRTRAEP 181
           F +   LT GA+ AL   G++ QK TY+PK+I+G WTGTMNLTEPQ G+DL L+RT+AEP
Sbjct: 122 FQMYNGLTHGAMSALAEHGSDQQKATYLPKMIAGNWTGTMNLTEPQCGTDLGLIRTKAEP 181

Query: 182 QGDGSFKLFGTKIFITWGEHDMAKNIAHLVLARTPNAPEGVKGISLFIVPKFLVNEDGSL 241
           Q DGS+ + G KI+I+ GEHDM++NI HLVLA+ P  PEGVKGISLFIVPKFLVN+DGSL
Sbjct: 182 QEDGSYAITGQKIWISAGEHDMSENIIHLVLAKIPGGPEGVKGISLFIVPKFLVNDDGSL 241

Query: 242 GERNDVHCVSIEHKLGIKASPTAVLQFGDHGGAIGHLIGEENRGLEYMFIMMNAARFAVG 301
           G RN V C  +EHK+GI  + T V+   ++ GA G L+GE ++GL  MF MMN AR +V 
Sbjct: 242 GARNAVSCGGLEHKMGIHGNATCVM---NYDGATGFLVGEMHKGLRAMFTMMNEARLSVA 298

Query: 302 MQGVGISDRAYQKAVAYAKDRVQSRPVDGSA---KQSVAIIQHPDVRRMLSTMRGLTEAS 358
           +QG    D AYQ A+ +A+DR+Q R + G+    K +  II HPDVRR L   +   E +
Sbjct: 299 LQGYAQGDIAYQNALGFARDRLQGRDITGAQAPNKPADPIIVHPDVRRNLMDQKSFVEGA 358

Query: 359 RALAYVAAAHCDIAHRHPDEAKRAEHQAIYEYLVPIVKGWSTELSIDVTSLGVQVHGGMG 418
           RAL +  A   D AHR     K AE  A+   L+P++KG+ T+   + T L  Q  GG G
Sbjct: 359 RALVFWGATLIDQAHR----CKDAEADAMISLLIPVMKGFLTDKGFETTVLAQQTLGGSG 414

Query: 419 FIEETGAAQYYRDARILPIYEGTTAIQANDLIGRKTVRDGGKVAKSLLAGVAETIEALGA 478
           F  E G  Q+ RDARI  IYEGT  IQ+ DL+GRK   +GGK   +    + +T      
Sbjct: 415 FTREWGLEQFVRDARIAMIYEGTNGIQSLDLVGRKLGLNGGKTVMAFF-DMVKTFLKENE 473

Query: 479 QQGPAFDSMKKYLAQGHQSLGAAVDFVVANTKGDPNAVFAGSVPYLKLAGIVLGG--W-Q 535
                       L    + L AA  + +++   +PN   +GS  ++ L G V  G  W +
Sbjct: 474 DNAELKSGFLDPLKAASKDLQAAGMYFMSDGMKNPNNALSGSYDFMHLFGHVCLGLMWAR 533

Query: 536 MARALLVAAQKRDEDPSFYGAKIATAQFYAEHVLPLTSALEASIVSAKGGESVLALSEDQ 595
           MA+A + A +  D D  F+  KIAT ++Y    LP+T    A I+S  G E V+AL    
Sbjct: 534 MAKASIAALEAGDTDTDFHATKIATGRYYMSRQLPMTGTHLARIMS--GAEPVMALDAAN 591

Query: 596 F 596
           F
Sbjct: 592 F 592