Pairwise Alignments

Query, 783 a.a., DNA-dependent helicase from Burkholderia phytofirmans PsJN

Subject, 788 a.a., ATP-dependent DNA helicase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  426 bits (1095), Expect = e-123
 Identities = 292/838 (34%), Positives = 434/838 (51%), Gaps = 114/838 (13%)

Query: 5   LANLNPEQHAAVTLPNEPALILAGAGSGKTRVLITRIAWLIQHGLASPATILAVTFTNKA 64
           +  LN  Q AAVT  + P+L++AGAGSGKTRVL  +IA+L+++G   P  ILA+TFTNKA
Sbjct: 6   IEELNESQCAAVTYNDGPSLVIAGAGSGKTRVLTYKIAYLLENGY-QPWNILALTFTNKA 64

Query: 65  AREMMSRLSALLPID-TRGMWIGTFHGLCNRMLRAHHRDAGLPATFQILDTADQLSAIKR 123
           AREM  R++  + ++  R +W+GTFH + +R+LRA  +  G  + F I D+AD  S I+ 
Sbjct: 65  AREMKDRIARQVGMERARYLWMGTFHSVFSRILRAEAKYIGFTSQFTIYDSADSKSLIRS 124

Query: 124 LMKGLNIDDEKYPAKNLQYFINNAKEQGLRPKDVDATDNFNRKFV--------ELYEAYD 175
           ++K + +D++ Y    +Q  I++AK   + P    A        +        E+Y  Y 
Sbjct: 125 IIKEMGLDEKTYKPGMVQARISSAKNHLVSPTGYAANKEAYEGDMAAKVPAVREIYTRYW 184

Query: 176 QQCQREGVVDFPELLLRCYELLAHNPPLRAHYQARFRHILVDEFQDTNKLQYAWLKMLAG 235
           ++C++ G +DF +LL+  Y L    P + A Y+ +FR++LVDE+QDTN  Q++ +  L  
Sbjct: 185 ERCRQAGAMDFDDLLVYTYILFRDFPEVLARYREQFRYVLVDEYQDTNYAQHSIVLQLTK 244

Query: 236 QTNSIFAVGDDDQSIYAFRGANVGNMRDFEHEFNVRHLIKLEQNYRSHGHILDAANQLIA 295
           +   +  VGDD QSIY+FRGA++ N+  F   +    + KLEQNYRS   I+ AAN LI 
Sbjct: 245 ENQRVCVVGDDAQSIYSFRGADIDNILYFTKVYPNTKVFKLEQNYRSTQTIVCAANSLIE 304

Query: 296 NNSRRLGKNLRTDAGHGEPVRVYESATDSQEASWIVEEIKALISTGT-SRSEIAILYRSN 354
            N R++ K + ++   GEP+ V+++ +D +E   +  +I  L    +   ++ AILYR+N
Sbjct: 305 KNERQIRKEVFSEKERGEPIGVFQAYSDVEEGDIVANKIAELRREHSYGYADFAILYRTN 364

Query: 355 AQSRTIEHTLVNAGIAYRVYGGLRFFERQEVKHALAYLRLIDNPNDDTAFARVVNFPTRG 414
           AQSR  E  L    + Y++YGGL F++R+E+K  +AY RL+ NPND+ AF R++N+P RG
Sbjct: 365 AQSRVFEEALRKRSMPYKIYGGLSFYQRKEIKDVIAYFRLVVNPNDEEAFKRIINYPARG 424

Query: 415 IGARSIEQLADAARLYNCSMAAAI--PYVAG-----KAGSSLAAFANLVGKMRAETQQMS 467
           IG  ++ ++  AA     S+ AA+  P   G        + L  F  L+     +    S
Sbjct: 425 IGDTTVGKIISAATENGVSLWAALCEPLSYGLNINKGTHTKLQGFRELIEGFMTDQVDKS 484

Query: 468 LPETVEYVVRTSGL--SEFYQNEREGQDRLENLQELVNAAAAFVS---EEGYGMDTPARS 522
             E    ++R SG+          E   R EN++ELVN    F +   EEG         
Sbjct: 485 AYEIGTDIIRRSGIINDVCQDTSPENLSRKENIEELVNGMNDFCALRQEEG--------- 535

Query: 523 IPLRPGATAAPELAVATDDPNTVVLDAPGIADPAQNPDTMTPLAGFLSHASLEAGDNQAQ 582
                             +PN  + D                   FLS  +L    +  +
Sbjct: 536 ------------------NPNISLTD-------------------FLSEIALLTDQDSDK 558

Query: 583 AGQ-EAVQLMTVHAAKGLEFTAVFITGLEEGLFPHENSAMESDGLEEERRLMYVAITRAK 641
           A   E + LMTVH+AKGLEF  VF+ GLEE LFP          LEEERRL YVAITRA+
Sbjct: 559 ADDGEKITLMTVHSAKGLEFKNVFVVGLEENLFPSGMVGDSPRALEEERRLFYVAITRAE 618

Query: 642 ERLYLSFAQSRMLHGQTRYNIRSRFFDELPQETLKWLTPKVEAGARWGGRSDNAGYGRDW 701
           E  Y+SFA++R  +G+  +   SRF  ++    + +L    EAG     RS + G GR  
Sbjct: 619 EHCYISFAKTRFRYGKMEFGSPSRFLRDI---DVNYLRLPHEAGV---SRSVDEGAGR-- 670

Query: 702 FARP---GYTGPASST--------------PAQLPA-------------------FANEQ 725
           F R    G+T  AS T               AQ+ A                    A+  
Sbjct: 671 FRREIEGGFTRAASPTRTPYGTKFSDRERPKAQVIAPTVPKNLKKVSAVSGSSIRSASAG 730

Query: 726 RAAETGFRVGQQVFHTKFGEGTITALEGGGADAKAQVKFKRHGEKWLALAVAKLQAVE 783
            A+ TG + GQ + H +FG G +  +EG G +AKA + FK  G+K L L  A+ + +E
Sbjct: 731 SASVTGVQAGQMIEHERFGLGEVIRVEGTGDNAKATIHFKNAGDKQLLLRFARFKVIE 788