Pairwise Alignments

Query, 383 a.a., dual-specificity RNA methyltransferase RlmN from Burkholderia phytofirmans PsJN

Subject, 373 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  401 bits (1030), Expect = e-116
 Identities = 212/378 (56%), Positives = 269/378 (71%), Gaps = 14/378 (3%)

Query: 3   SSPTVNLLDLDAQGLVAYCDSLGEKPFRAKQLQRWIHQYNAADFDGMTDLAKSLREKLKG 62
           S   +NLLDLD  GL A    +GEKPFRA+Q+ +WI+ +  +DF+ MT++ K++R KL  
Sbjct: 2   SEKKINLLDLDLPGLKALLTEMGEKPFRAQQIMQWIYHFGVSDFEQMTNINKAMRAKLAA 61

Query: 63  RATISMPGIVSDNISTDGTRKWLIDVGNSNAVETVYIPEETRGTLCVSSQAGCAVNCRFC 122
           R  I  P I S   S+DGT K+ I+VG    VETVYIPE+ R TLCVSSQ GCA+ C FC
Sbjct: 62  RCEIVAPEITSYQKSSDGTIKFAINVGQGQEVETVYIPEDDRATLCVSSQVGCALECTFC 121

Query: 123 STGKQGFSRNLTTAEIIGQLRMAEFALRASRGIDGGRATGGDGKGERVVTNVVMMGMGEP 182
           ST +QGF+RNLT +EI+GQ+       R S  +   + T     GER ++NVVMMGMGEP
Sbjct: 122 STAQQGFNRNLTVSEIVGQI------WRVSHFLGFQKET-----GERPISNVVMMGMGEP 170

Query: 183 LLNYDAVVPAMRLMLDDNAYGLSRRRVTLSTSGVVPMMDRLGADLPVALAVSLHAPSDPL 242
           LLN   VVPAM +MLDD  +GLS+RRVTLSTSGVVP +D+LG  + VALAVS+HAP+D L
Sbjct: 171 LLNLANVVPAMNIMLDDYGFGLSKRRVTLSTSGVVPALDKLGDVIDVALAVSIHAPNDEL 230

Query: 243 RDMLVPLNKKYPLRELMAACQRYLKV--APRDFITFEYCMLDGVNDSEAQARELLALTRD 300
           RD+LVP+NKKYPL+E +AA +RYL+   A R  +T EY MLD +NDS  QA EL  L +D
Sbjct: 231 RDVLVPINKKYPLQEFLAAIRRYLEKSNANRGRVTLEYVMLDHINDSTDQAHELAKLMKD 290

Query: 301 VPCKFNLIPFNPFPESGLIRSKPEQIKRFAQVLMDAGVVTTVRKTRGDDIDAACGQLAGA 360
            PCK NLIPFNP+P S   RS   +I RFA+VLM+  +   VRKTRGDDIDAACGQLAG 
Sbjct: 291 TPCKINLIPFNPYPGSPYGRSSNSRIDRFAKVLMEYDLTVIVRKTRGDDIDAACGQLAGD 350

Query: 361 VKDRT-RLAERTGKAAKV 377
           ++DRT RLA++  + +++
Sbjct: 351 IRDRTKRLAKKRMQESQI 368